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InterPro: IPR017941 Rieske [2Fe-2S] iron-sulphur domain
Protein matches
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UniProtKB Matches: 7691 proteins |
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Accession
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IPR017941 Rieske_2Fe-2S |
Type
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Domain |
Signatures
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InterPro Relationships
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Children
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IPR005805 Rieske iron-sulphur protein, C-terminal
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Found in
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IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit
IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit
IPR012747 MocE Rieske [2Fe-2S]
IPR012748 Nitrite reductase [NAD(P)H] large subunit, NirD
IPR014067 Arsenite oxidase, small subunit
IPR014349 Rieske iron-sulphur protein
IPR017586 Rieske iron-sulphur protein SoxL2
IPR017638 Anthranilate 1,2-dioxygenase, large subunit
IPR017639 Benzoate 1,2-dioxygenase, large subunit
IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit
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Contains
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IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site
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GO Term annotation
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Process
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GO:0055114 oxidation reduction
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Function
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GO:0016491 oxidoreductase activity
GO:0051537 2 iron, 2 sulfur cluster binding
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InterPro annotation
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Entry Details in BioMart
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Abstract
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There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176), and other hybrid or mixed metal types. Two general types of [2Fe-2S] clusters are known and they differ in their coordinating residues. The ferredoxin-type [2Fe-2S] clusters are coordinated to the protein by four cysteine residues (see PDOC00175). The Rieske-type [2Fe-2S] cluster is coordinated to its protein by two cysteine residues and two histidine residues [1, 2].
The structure of several Rieske domains has been solved [3]. It contains three layers of antiparallel beta sheets forming two beta sandwiches. Both beta sandwiches share the central sheet 2. The metal-binding site is at the top of the beta sandwich formed by the sheets 2 and 3. The Fe1 iron of the Rieske cluster is coordinated by two cysteines while the other iron Fe2 is coordinated by two histidines. Two inorganic sulphide ions bridge the two iron ions forming a flat, rhombic cluster.
Rieske-type iron-sulphur clusters are common to electron transfer chains of mitochondria and chloroplast and to non-haem iron oxygenase systems:
- The Rieske protein of the Ubiquinol-cytochrome c reductase (EC:1.10.2.2) (also known as the bc1 complex or complex III), a complex of the electron transport chains of mitochondria and of some aerobic prokaryotes; it catalyses the oxidoreduction of ubiquinol and cytochrome c.
- The Rieske protein of chloroplastic plastoquinone-plastocyanin reductase (EC:1.10.99.1) (also known as the b6f complex). It is functionally similar to the bc1 complex and catalyses the oxidoreduction of plastoquinol and cytochrome f.
- Bacterial naphthalene 1,2-dioxygenase subunit alpha, a component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyses the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol.
- Bacterial 3-phenylpropionate dioxygenase ferredoxin subunit.
- Bacterial toluene monoxygenase.
- Bacterial biphenyl dioxygenase.
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Structural links
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Database links
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Interactions
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This domain has been experimentally proven to be involved in Protein:Protein interactions. Representative
data is shown with the following
example proteins:
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Additional Reading
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Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr.
Ensemble refinement of protein crystal structures: validation and application.
Structure 15 2007 1040-52
[PubMed: 17850744]
http://dx.doi.org/10.1016/j.str.2007.06.019
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Huang JT, Struck F, Matzinger DF, Levings CS 3rd.
Functional analysis in yeast of cDNA coding for the mitochondrial Rieske iron-sulfur protein of higher plants.
Proc. Natl. Acad. Sci. U.S.A. 88 1991 10716-20
[PubMed: 1961737]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=1961737&action=stream&blobtype=pdf
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Yamashita E, Zhang H, Cramer WA.
Structure of the cytochrome b6f complex: quinone analogue inhibitors as ligands of heme cn.
J. Mol. Biol. 370 2007 39-52
[PubMed: 17498743]
http://dx.doi.org/10.1016/j.jmb.2007.04.011
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Solmaz SR, Hunte C.
Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer.
J. Biol. Chem. 283 2008 17542-9
[PubMed: 18390544]
http://dx.doi.org/10.1074/jbc.M710126200
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Brandt U, Yu L, Yu CA, Trumpower BL.
The mitochondrial targeting presequence of the Rieske iron-sulfur protein is processed in a single step after insertion into the cytochrome bc1 complex in mammals and retained as a subunit in the complex.
J. Biol. Chem. 268 1993 8387-90
[PubMed: 8386158]
http://intl.jbc.org/cgi/content/abstract/268/12/8387
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Kolling DJ, Brunzelle JS, Lhee S, Crofts AR, Nair SK.
Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure 15 2007 29-38
[PubMed: 17223530]
http://dx.doi.org/10.1016/j.str.2006.11.012
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Esser L, Elberry M, Zhou F, Yu CA, Yu L, Xia D.
Inhibitor-complexed structures of the cytochrome bc1 from the photosynthetic bacterium Rhodobacter sphaeroides.
J. Biol. Chem. 283 2008 2846-57
[PubMed: 18039651]
http://dx.doi.org/10.1074/jbc.M708608200
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Gupta R, Mould RM, He Z, Luan S.
A chloroplast FKBP interacts with and affects the accumulation of Rieske subunit of cytochrome bf complex.
Proc. Natl. Acad. Sci. U.S.A. 99 2002 15806-11
[PubMed: 12424338]
http://dx.doi.org/10.1073/pnas.222550399
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InterPro 23.1
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