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InterPro: IPR015289 Alpha-L-arabinofuranosidase B, catalytic

Protein matchesHelp
UniProtKB
Matches:
64 proteins
AccessionHelp IPR015289 A-L-arabinofuranosidase_B_cat
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR013320 Concanavalin A-like lectin/glucanase, subgroup
GO Term annotationHelp
Process GO:0031221 arabinan metabolic process
Function GO:0046556 alpha-N-arabinofuranosidase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This domain, found in fungal alpha-L-arabinofuranosidase B, adopts a beta-sandwich fold similar to that of concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyses the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan [1].

Structural linksHelp
SCOP: b.29.1.21
CATH: 2.60.120.200
Database linksHelp
Enzyme: EC:3.2.1.55

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR015289 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P42255 Alpha-N-arabinofuranosidase B

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR007934 Alpha-L-arabinofuranosidase B
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
IPR015289 Alpha-L-arabinofuranosidase B, catalytic
IPR008985 Concanavalin A-like lectin/glucanase
SWISS-MODEL

PublicationsHelp
1. Miyanaga A, Koseki T, Matsuzawa H, Wakagi T, Shoun H, Fushinobu S.
Crystal structure of a family 54 alpha-L-arabinofuranosidase reveals a novel carbohydrate-binding module that can bind arabinose.
J. Biol. Chem. 279 44907-14 2004 [PubMed: 15292273]
http://dx.doi.org/10.1074/jbc.M405390200

Additional ReadingHelp
Miyanaga A, Koseki T, Miwa Y, Mese Y, Nakamura S, Kuno A, Hirabayashi J, Matsuzawa H, Wakagi T, Shoun H, Fushinobu S.
The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose.
Biochem. J. 399 2006 503-11 [PubMed: 16846393]
http://dx.doi.org/10.1042/BJ20060567
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InterPro 23.1