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InterPro: IPR015289 Alpha-L-arabinofuranosidase B, catalytic
Protein matches
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UniProtKB Matches: 64 proteins |
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Accession
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IPR015289 A-L-arabinofuranosidase_B_cat |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR013320 Concanavalin A-like lectin/glucanase, subgroup
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GO Term annotation
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Process
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GO:0031221 arabinan metabolic process
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Function
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GO:0046556 alpha-N-arabinofuranosidase activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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This domain, found in fungal alpha-L-arabinofuranosidase B, adopts a beta-sandwich fold similar to that of concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyses the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan [1].
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Structural links
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Database links
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Additional Reading
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Miyanaga A, Koseki T, Miwa Y, Mese Y, Nakamura S, Kuno A, Hirabayashi J, Matsuzawa H, Wakagi T, Shoun H, Fushinobu S.
The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose.
Biochem. J. 399 2006 503-11
[PubMed: 16846393]
http://dx.doi.org/10.1042/BJ20060567
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InterPro 23.1
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