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InterPro: IPR015219 Glucodextranase B

Protein matchesHelp
UniProtKB
Matches:
3 proteins
AccessionHelp IPR015219 Glucodextran_B
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR014756 Immunoglobulin E-set
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The glucodextranase B domain adopts a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. It acts as a cell wall anchor, interacting with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface [1].

Structural linksHelp
SCOP: b.1.18.2

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR015219 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
Q9LBQ9 Glucodextranase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR006425 Glucan 1,4-alpha-glucosidase
IPR015220 Glucodextranase N
IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup
IPR015922 Carbohydrate-binding domain, family 9-like, subgroup
IPR014756 Immunoglobulin E-set
IPR011013 Glycoside hydrolase-type carbohydrate-binding
IPR012341 Six-hairpin glycosidase
IPR008928 Six-hairpin glycosidase-like
IPR015219 Glucodextranase B
IPR019248 Protein of unknown function DUF2223
IPR011613 Glycoside hydrolase 15-related
IPR008960 Carbohydrate-binding domain family 9-like
IPR000165 Glycoside hydrolase, family 15
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Mizuno M, Tonozuka T, Suzuki S, Uotsu-Tomita R, Kamitori S, Nishikawa A, Sakano Y.
Structural insights into substrate specificity and function of glucodextranase.
J. Biol. Chem. 279 10575-83 2004 [PubMed: 14660574]
http://dx.doi.org/10.1074/jbc.M310771200

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InterPro 23.1