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InterPro: IPR015176 Lyase, N-terminal

Protein matchesHelp
UniProtKB
Matches:
68 proteins
AccessionHelp IPR015176 Lyase_N
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR008979 Galactose-binding domain-like
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This entry represents a domain predominantly found in chondroitin ABC lyase I, adopting a jelly-roll fold topology consisting of a two-layered bent beta-sheet sandwich with one short alpha-helix. The convex beta sheet is composed of five antiparallel strands, whilst the concave beta-sheet contains five antiparallel beta-strands with a loop between two consecutive strands folding back onto the concave surface. This domain is required for binding of the protein to long glycosaminoglycan chains [1].

Structural linksHelp
SCOP: b.18.1.17
CATH: 2.60.120.410

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR015176 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P59807 Chondroitin ABC endolyase 1

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup
IPR012329 Polysaccharide lyase family 8, N-terminal
IPR004103 Polysaccharide lyase family 8, C-terminal
IPR011013 Glycoside hydrolase-type carbohydrate-binding
IPR008929 Chondroitin AC/alginate lyase
IPR011071 Polysaccharide lyase family 8-like, C-terminal
IPR015177 Lyase, catalytic
IPR008979 Galactose-binding domain-like
IPR015176 Lyase, N-terminal
IPR003159 Polysaccharide lyase family 8, central domain
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Huang W, Lunin VV, Li Y, Suzuki S, Sugiura N, Miyazono H, Cygler M.
Crystal structure of Proteus vulgaris chondroitin sulfate ABC lyase I at 1.9A resolution.
J. Mol. Biol. 328 623-34 2003 [PubMed: 12706721]
http://dx.doi.org/10.1016/S0022-2836(03)00345-0

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InterPro 23.1