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InterPro: IPR015009 Vinculin-binding site-containing domain

Protein matchesHelp
UniProtKB
Matches:
48 proteins
AccessionHelp IPR015009 Vinculin-bd_dom
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR015710 Talin related
IPR015711 Talin
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Vinculin binding sites are predominantly found in talin and talin-like molecules, enabling binding of vinculin to talin, stabilising integrin-mediated cell-matrix junctions. Talin, in turn, links integrins to the actin cytoskeleton. The consensus sequence for Vinculin binding sites is LxxAAxxVAxxVxxLIxxA, with a secondary structure prediction of four amphipathic helices. The hydrophobic residues that define the VBS are themselves 'masked' and are buried in the core of a series of helical bundles that make up the talin rod [1].

Structural linksHelp
SCOP: a.24.9.2

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR015009 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P26039 Talin-1

P54939 Talin-1

Q9Y490 Talin-1

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR011993 Pleckstrin homology-type
IPR015710 Talin related
IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle
IPR006077 Vinculin/alpha-catenin
IPR000299 FERM domain
IPR019747 FERM conserved site
IPR019749 Band 4.1 domain
IPR019748 FERM central domain
IPR015224 Talin, central
IPR018979 FERM, N-terminal
IPR002558 I/LWEQ
IPR015009 Vinculin-binding site-containing domain
PDB Chain
ModBase
CATH Domain
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Gingras AR, Vogel KP, Steinhoff HJ, Ziegler WH, Patel B, Emsley J, Critchley DR, Roberts GC, Barsukov IL.
Structural and dynamic characterization of a vinculin binding site in the talin rod.
Biochemistry 45 1805-17 2006 [PubMed: 16460027]
http://dx.doi.org/10.1021/bi052136l

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InterPro 23.1