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InterPro: IPR013798 Indole-3-glycerol phosphate synthase

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UniProtKB
Matches:
2542 proteins
AccessionHelp IPR013798 Indole-3-glycerol_P_synth
SecondaryHelp IPR001468
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR011060 Ribulose-phosphate binding barrel
IPR016302 Anthranilate synthase, component II, fungi
Contains IPR001468 Indole-3-glycerol phosphate synthase, central region
InterPro annotation
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AbstractHelp

Indole-3-glycerol phosphate synthase (EC:4.1.1.48) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24) (PRAI) activity (see IPR001240), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (EC:2.4.2) (GATase) N-terminal domain (see IPR000991).

A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand [1].

Structural linksHelp
SCOP: c.1.2.4 , c.1.2.6
CATH: 3.20.20.70
Database linksHelp
Enzyme: EC:4.1.1.48
Pfam Clan: CL0036.20

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR013798 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P00909 Tryptophan biosynthesis protein trpCF

P00937 Anthranilate synthase component 2

P24920 Tryptophan biosynthesis protein TRP1

P49572 Indole-3-glycerol phosphate synthase, chloroplastic

Q55508 Indole-3-glycerol phosphate synthase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR011702 Glutamine amidotransferase superfamily
IPR013785 Aldolase-type TIM barrel
IPR001240 N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
IPR013798 Indole-3-glycerol phosphate synthase
IPR017926 Glutamine amidotransferase type 1
IPR006221 Glutamine amidotransferase of anthranilate synthase
IPR006220 Anthranilate synthase component II/delta crystallin
IPR001468 Indole-3-glycerol phosphate synthase, central region
IPR000991 Glutamine amidotransferase class-I, C-terminal
IPR011060 Ribulose-phosphate binding barrel
IPR001317 Carbamoyl phosphate synthase, GATase domain
PDB Chain
ModBase
CATH Domain
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Goldman A.
How to make my blood boil.
Structure 3 1277-9 1995 [PubMed: 8747452]
http://dx.doi.org/10.1016/S0969-2126(01)00263-5

Additional ReadingHelp
Knochel T, Pappenberger A, Jansonius JN, Kirschner K.
The crystal structure of indoleglycerol-phosphate synthase from Thermotoga maritima. Kinetic stabilization by salt bridges.
J. Biol. Chem. 277 2002 8626-34 [PubMed: 11741953]
http://dx.doi.org/10.1074/jbc.M109517200
Hennig M, Darimont BD, Jansonius JN, Kirschner K.
The catalytic mechanism of indole-3-glycerol phosphate synthase: crystal structures of complexes of the enzyme from Sulfolobus solfataricus with substrate analogue, substrate, and product.
J. Mol. Biol. 319 2002 757-66 [PubMed: 12054868]
http://dx.doi.org/10.1016/S0022-2836(02)00378-9
Schneider B, Knochel T, Darimont B, Hennig M, Dietrich S, Babinger K, Kirschner K, Sterner R.
Role of the N-terminal extension of the (betaalpha)8-barrel enzyme indole-3-glycerol phosphate synthase for its fold, stability, and catalytic activity.
Biochemistry 44 2005 16405-12 [PubMed: 16342933]
http://dx.doi.org/10.1021/bi051640n
Zhu J, Burgner JW, Harms E, Belitsky BR, Smith JL.
A new arrangement of (beta/alpha)8 barrels in the synthase subunit of PLP synthase.
J. Biol. Chem. 280 2005 27914-23 [PubMed: 15911615]
http://dx.doi.org/10.1074/jbc.M503642200
Ivens A, Mayans O, Szadkowski H, Jurgens C, Wilmanns M, Kirschner K.
Stabilization of a (betaalpha)8-barrel protein by an engineered disulfide bridge.
Eur. J. Biochem. 269 2002 1145-53 [PubMed: 11856350]
http://dx.doi.org/10.1046/j.1432-1033.2002.02745.x
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InterPro 23.1