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InterPro: IPR013115 Histidine biosynthesis HisG, C-terminal

Protein matchesHelp
UniProtKB
Matches:
720 proteins
AccessionHelp IPR013115 HisG_C
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
Found in IPR001348 Histidine biosynthesis HisG: ATP phosphoribosyltransferase
IPR020621 Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup
GO Term annotationHelp
Process GO:0000105 histidine biosynthetic process
Function GO:0000287 magnesium ion binding
GO:0003879 ATP phosphoribosyltransferase activity
Component GO:0005737 cytoplasm
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

ATP phosphoribosyltransferase (EC:2.4.2.17) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions [1].

ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate

Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides.

This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [2, 3]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.

Structural linksHelp
SCOP: c.94.1.1 , d.58.5.3
Database linksHelp
Enzyme: EC:2.4.2.17
PANDIT: PF08029
Blocks: IPB013115
Pfam Clan: CL0089.9

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR013115 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O27550 ATP phosphoribosyltransferase

P00498 ATP phosphoribosyltransferase

P40373 ATP phosphoribosyltransferase

P60757 ATP phosphoribosyltransferase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal
IPR018198 ATP phosphoribosyltransferase, conserved site
IPR013820 ATP phosphoribosyltransferase, catalytic domain
IPR011322 Nitrogen regulatory PII-like, alpha/beta
IPR001348 Histidine biosynthesis HisG: ATP phosphoribosyltransferase
IPR013115 Histidine biosynthesis HisG, C-terminal
IPR020621 Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Sinha SC, Smith JL.
The PRT protein family.
Curr. Opin. Struct. Biol. 11 733-9 2001 [PubMed: 11751055]
http://dx.doi.org/10.1016/S0959-440X(01)00274-3
2. Lohkamp B, McDermott G, Campbell SA, Coggins JR, Lapthorn AJ.
The structure of Escherichia coli ATP-phosphoribosyltransferase: identification of substrate binding sites and mode of AMP inhibition.
J. Mol. Biol. 336 131-44 2004 [PubMed: 14741209]
http://dx.doi.org/10.1016/j.jmb.2003.12.020
3. Cho Y, Sharma V, Sacchettini JC.
Crystal structure of ATP phosphoribosyltransferase from Mycobacterium tuberculosis.
J. Biol. Chem. 278 8333-9 2003 [PubMed: 12511575]
http://dx.doi.org/10.1074/jbc.M212124200

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InterPro 23.1