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InterPro: IPR013111 EGF, extracellular
Protein matches
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UniProtKB Matches: 1818 proteins |
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Accession
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IPR013111 EGF_extracell |
Type
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Domain |
Signatures
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InterPro Relationships
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Found in
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IPR001169 Integrin beta subunit, C-terminal
IPR011398 Fibrillin
IPR012012 Integrin beta subunit, subgroup
IPR012013 Integrin beta-4 subunit
IPR012111 Hemolectin/hemocytin
IPR015435 Integrin beta-3 subunit, C-terminal
IPR015436 Integrin beta-6 subunit, C-terminal
IPR015437 Integrin beta-7 subunit, C-terminal
IPR015438 Integrin beta-1 subunit, C-terminal
IPR015439 Integrin beta-2 subunit, C-terminal
IPR015440 Integrin beta-nu subunit, C-terminal
IPR015442 Integrin beta-8 subunit-like, C-terminal
IPR015781 Tyrosine-protein kinase, angiopoietin receptor
IPR015812 Integrin beta subunit
IPR020696 Tyrosine-protein kinase, receptor Tie-1
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Contains
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IPR013032 EGF-like region, conserved site
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InterPro annotation
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Entry Details in BioMart
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Abstract
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A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF)
has been shown [1, 2, 3, 4, 5] to be present, in a more
or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to
contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in
what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in
the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin
G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide
bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet.
Subdomains between the conserved cysteines vary in length.
This entry contains EGF domains found in a variety of extracellular and membrane proteins
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Structural links
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Database links
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Pfam Clan: CL0001.23
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Example proteins
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A0A1F4 Protein eyes shut
P05106 Integrin beta-3
P14585 Protein lin-12
Q3UV74 Integrin beta-2-like protein
Q7T6Y2 Putative serine/threonine-protein kinase/receptor R831
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR001791 |
Laminin G |
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| IPR013091 |
EGF calcium-binding |
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| IPR017441 |
Protein kinase, ATP binding site |
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| IPR000800 |
Notch domain |
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| IPR017442 |
Serine/threonine-protein kinase-like domain |
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| IPR006210 |
EGF-like |
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| IPR011009 |
Protein kinase-like domain |
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| IPR011656 |
Notch, NODP domain |
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| IPR012012 |
Integrin beta subunit, subgroup |
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| IPR000719 |
Protein kinase, catalytic domain |
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| IPR002290 |
Serine/threonine-protein kinase domain |
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| IPR013032 |
EGF-like region, conserved site |
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| IPR002110 |
Ankyrin repeat |
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| IPR012680 |
Laminin G, subdomain 2 |
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| IPR018097 |
EGF-like calcium-binding, conserved site |
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| IPR002035 |
von Willebrand factor, type A |
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| IPR012896 |
Integrin beta subunit, tail |
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| IPR001881 |
EGF-like calcium-binding |
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| IPR001245 |
Tyrosine-protein kinase, catalytic domain |
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| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
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| IPR002369 |
Integrin beta subunit, N-terminal |
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| IPR001169 |
Integrin beta subunit, C-terminal |
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| IPR013111 |
EGF, extracellular |
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| IPR010660 |
Notch, NOD domain |
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| IPR020683 |
Ankyrin repeat-containing domain |
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| IPR008271 |
Serine/threonine-protein kinase, active site |
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| IPR001438 |
EGF-like, type 2 |
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| IPR000152 |
EGF-type aspartate/asparagine hydroxylation site |
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| IPR003659 |
Plexin/semaphorin/integrin |
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| IPR014836 |
Integrin beta subunit, cytoplasmic |
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| IPR000742 |
EGF-like, type 3 |
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| IPR015812 |
Integrin beta subunit |
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| IPR015435 |
Integrin beta-3 subunit, C-terminal |
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| IPR001054 |
Adenylyl cyclase class-3/4/guanylyl cyclase |
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| IPR008985 |
Concanavalin A-like lectin/glucanase |
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| IPR006209 |
EGF |
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ModBase |
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SWISS-MODEL |
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PDB Chain |
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CATH Domain |
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SCOP Domain |
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Additional Reading
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Xiong JP, Stehle T, Diefenbach B, Zhang R, Dunker R, Scott DL, Joachimiak A, Goodman SL, Arnaout MA.
Crystal structure of the extracellular segment of integrin alpha Vbeta3.
Science 294 2001 339-45
[PubMed: 11546839]
http://dx.doi.org/10.1126/science.1064535
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Xiong JP, Stehle T, Zhang R, Joachimiak A, Frech M, Goodman SL, Arnaout MA.
Crystal structure of the extracellular segment of integrin alpha Vbeta3 in complex with an Arg-Gly-Asp ligand.
Science 296 2002 151-5
[PubMed: 11884718]
http://dx.doi.org/10.1126/science.1069040
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Xiong JP, Stehle T, Goodman SL, Arnaout MA.
A novel adaptation of the integrin PSI domain revealed from its crystal structure.
J. Biol. Chem. 279 2004 40252-4
[PubMed: 15299032]
http://dx.doi.org/10.1074/jbc.C400362200
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InterPro 23.1
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