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InterPro: IPR013111 EGF, extracellular

Protein matchesHelp
UniProtKB
Matches:
1818 proteins
AccessionHelp IPR013111 EGF_extracell
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR001169 Integrin beta subunit, C-terminal
IPR011398 Fibrillin
IPR012012 Integrin beta subunit, subgroup
IPR012013 Integrin beta-4 subunit
IPR012111 Hemolectin/hemocytin
IPR015435 Integrin beta-3 subunit, C-terminal
IPR015436 Integrin beta-6 subunit, C-terminal
IPR015437 Integrin beta-7 subunit, C-terminal
IPR015438 Integrin beta-1 subunit, C-terminal
IPR015439 Integrin beta-2 subunit, C-terminal
IPR015440 Integrin beta-nu subunit, C-terminal
IPR015442 Integrin beta-8 subunit-like, C-terminal
IPR015781 Tyrosine-protein kinase, angiopoietin receptor
IPR015812 Integrin beta subunit
IPR020696 Tyrosine-protein kinase, receptor Tie-1
Contains IPR013032 EGF-like region, conserved site
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [1, 2, 3, 4, 5] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.

This entry contains EGF domains found in a variety of extracellular and membrane proteins

Structural linksHelp
SCOP: g.3.11.6
Database linksHelp
PANDIT: PF07974
Blocks: IPB013111
Pfam Clan: CL0001.23

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR013111 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
A0A1F4 Protein eyes shut

P05106 Integrin beta-3

P14585 Protein lin-12

Q3UV74 Integrin beta-2-like protein

Q7T6Y2 Putative serine/threonine-protein kinase/receptor R831

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR001791 Laminin G
IPR013091 EGF calcium-binding
IPR017441 Protein kinase, ATP binding site
IPR000800 Notch domain
IPR017442 Serine/threonine-protein kinase-like domain
IPR006210 EGF-like
IPR011009 Protein kinase-like domain
IPR011656 Notch, NODP domain
IPR012012 Integrin beta subunit, subgroup
IPR000719 Protein kinase, catalytic domain
IPR002290 Serine/threonine-protein kinase domain
IPR013032 EGF-like region, conserved site
IPR002110 Ankyrin repeat
IPR012680 Laminin G, subdomain 2
IPR018097 EGF-like calcium-binding, conserved site
IPR002035 von Willebrand factor, type A
IPR012896 Integrin beta subunit, tail
IPR001881 EGF-like calcium-binding
IPR001245 Tyrosine-protein kinase, catalytic domain
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
IPR002369 Integrin beta subunit, N-terminal
IPR001169 Integrin beta subunit, C-terminal
IPR013111 EGF, extracellular
IPR010660 Notch, NOD domain
IPR020683 Ankyrin repeat-containing domain
IPR008271 Serine/threonine-protein kinase, active site
IPR001438 EGF-like, type 2
IPR000152 EGF-type aspartate/asparagine hydroxylation site
IPR003659 Plexin/semaphorin/integrin
IPR014836 Integrin beta subunit, cytoplasmic
IPR000742 EGF-like, type 3
IPR015812 Integrin beta subunit
IPR015435 Integrin beta-3 subunit, C-terminal
IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase
IPR008985 Concanavalin A-like lectin/glucanase
IPR006209 EGF
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Campbell ID, Bork P.
Epidermal growth factor-like modules.
Curr. Opin. Struct. Biol. 3 385-92 1993
2. Appella E, Weber IT, Blasi F.
Structure and function of epidermal growth factor-like regions in proteins.
FEBS Lett. 231 1-4 1988 [PubMed: 3282918]
http://dx.doi.org/10.1016/0014-5793(88)80690-2
3. Doolittle RF, Feng DF, Johnson MS.
Computer-based characterization of epidermal growth factor precursor.
Nature 307 558-60 1984 [PubMed: 6607417]
http://dx.doi.org/10.1038/307558a0
4. Davis CG.
The many faces of epidermal growth factor repeats.
New Biol. 2 410-9 1990 [PubMed: 2288911]
5. Blomquist MC, Hunt LT, Barker WC.
Vaccinia virus 19-kilodalton protein: relationship to several mammalian proteins, including two growth factors.
Proc. Natl. Acad. Sci. U.S.A. 81 7363-7 1984 [PubMed: 6334307]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=6334307&action=stream&blobtype=pdf

Additional ReadingHelp
Xiong JP, Stehle T, Diefenbach B, Zhang R, Dunker R, Scott DL, Joachimiak A, Goodman SL, Arnaout MA.
Crystal structure of the extracellular segment of integrin alpha Vbeta3.
Science 294 2001 339-45 [PubMed: 11546839]
http://dx.doi.org/10.1126/science.1064535
Xiong JP, Stehle T, Zhang R, Joachimiak A, Frech M, Goodman SL, Arnaout MA.
Crystal structure of the extracellular segment of integrin alpha Vbeta3 in complex with an Arg-Gly-Asp ligand.
Science 296 2002 151-5 [PubMed: 11884718]
http://dx.doi.org/10.1126/science.1069040
Xiong JP, Stehle T, Goodman SL, Arnaout MA.
A novel adaptation of the integrin PSI domain revealed from its crystal structure.
J. Biol. Chem. 279 2004 40252-4 [PubMed: 15299032]
http://dx.doi.org/10.1074/jbc.C400362200
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InterPro 23.1