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InterPro: IPR012705 2-methylcitrate dehydratase PrpD

Protein matchesHelp
UniProtKB
Matches:
369 proteins
AccessionHelp IPR012705 2Me_IsoCit_deHydtase_PrpD
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR005656 MmgE/PrpD
GO Term annotationHelp
Process GO:0019629 propionate catabolic process, 2-methylcitrate cycle
Function GO:0047547 2-methylcitrate dehydratase activity
GO:0051537 2 iron, 2 sulfur cluster binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

At least five distinct pathways exist for the catabolism of propionate by way of propionyl-CoA. Most members of this family are bacterial proteins known or predicted to act as 2-methylcitrate dehydratase; an enzyme which catalyses the third step the methylcitrate cycle of propionate catabolism [1]. A related clade of archaeal proteins that may or may not be functionally equivalent is excluded from this family. The PrpD enzyme of Escherichia coli is responsible for the minor aconitase activity (AcnC) not accounted for by AcnA and AcnB [2]. Some proteins in this entry are annotated as MmgE, a Bacillus subtilis protein encoded within an operon which is expressed during sporulation, subject to catabolite repression [3].

Structural linksHelp
SCOP: e.44.1.1
Database linksHelp
Enzyme: EC:4.2.1.79

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR012705 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P77243 2-methylcitrate dehydratase

Q12428 Probable 2-methylcitrate dehydratase

Q54IJ0 Probable 2-methylcitrate dehydratase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR012705 2-methylcitrate dehydratase PrpD
IPR005656 MmgE/PrpD
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp
1. Horswill AR, Escalante-Semerena JC.
In vitro conversion of propionate to pyruvate by Salmonella enterica enzymes: 2-methylcitrate dehydratase (PrpD) and aconitase Enzymes catalyze the conversion of 2-methylcitrate to 2-methylisocitrate.
Biochemistry 40 4703-13 2001 [PubMed: 11294638]
http://dx.doi.org/10.1021/bi015503b
2. Blank L, Green J, Guest JR.
AcnC of Escherichia coli is a 2-methylcitrate dehydratase (PrpD) that can use citrate and isocitrate as substrates.
Microbiology (Reading, Engl.) 148 133-46 2002 [PubMed: 11782506]
http://mic.sgmjournals.org/cgi/content/abstract/148/1/133
3. Bryan EM, Beall BW, Moran CP Jr.
A sigma E dependent operon subject to catabolite repression during sporulation in Bacillus subtilis.
J. Bacteriol. 178 4778-86 1996 [PubMed: 8759838]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=8759838

Additional ReadingHelp
Brock M, Maerker C, Schutz A, Volker U, Buckel W.
Oxidation of propionate to pyruvate in Escherichia coli. Involvement of methylcitrate dehydratase and aconitase.
Eur. J. Biochem. 269 2002 6184-94 [PubMed: 12473114]
http://dx.doi.org/10.1046/j.1432-1033.2002.03336.x
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InterPro 23.1