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InterPro: IPR012581 NUC156
Protein matches
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UniProtKB
Matches:
49 proteins
Overview:
sorted by AC
,
sorted by name
,
of known structure
,
proteins with splice variants
Detailed:
sorted by AC
,
sorted by name
,
of known structure
proteins with splice variants
Table:
For all matching proteins
,
of known structure
Architectures
Accession List
Matches in BioMart
Accession
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IPR012581 NUC156
Type
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Family
Signatures
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Database
ID
Name
Proteins
Pfam
PF08160
NUC156
49
Signatures in BioMart
InterPro annotation
Entry Details in BioMart
Abstract
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This C-terminal domain is found in nucleolar proteins [
1
].
Database links
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PANDIT:
PF08160
Blocks:
IPB012581
Taxonomic coverage
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Taxonomic division of matching proteins
TaxId
Name
Protein count
Taxonomic division of matching proteins
TaxId
Name
Protein count
Taxonomic division of matching proteins
TaxId
Name
Protein count
2157
Archaea
1
FASTA
Subclassification
28890
Euryarchaeota
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
Taxonomic division of matching proteins
TaxId
Name
Protein count
Taxonomic division of matching proteins
TaxId
Name
Protein count
Taxonomic division of matching proteins
TaxId
Name
Protein count
4530
Oryza sativa (Rice)
7
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
3702
Arabidopsis thaliana (Mouse-ear cress)
3
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
33090
Viridiplantae
22
FASTA
Subclassification
3041
Chlorophyta (green algae)
2
FASTA
35493
Streptophyta
20
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
33090
Viridiplantae
22
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
5719
Parabasalidea (parabasalids)
2
FASTA
554915
Amoebozoa
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
2759
Eukaryota (eucaryotes)
48
FASTA
Subclassification
33090
Viridiplantae
22
FASTA
33154
Fungi/Metazoa group
23
FASTA
554915
Amoebozoa
1
FASTA
5719
Parabasalidea (parabasalids)
2
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
9606
Homo sapiens (Human)
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
10090
Mus musculus (Mouse)
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
7711
Chordata (chordates)
5
FASTA
Subclassification
7735
Cephalochordata
1
FASTA
89593
Craniata
4
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
6656
Arthropoda (arthropods)
11
FASTA
Subclassification
6843
Chelicerata
1
FASTA
197563
Mandibulata
10
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
7227
Drosophila melanogaster (Fruit fly)
2
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
33208
Metazoa (metazoans)
22
FASTA
Subclassification
6072
Eumetazoa
21
FASTA
6073
Cnidaria (cnidarians)
2
FASTA
10226
Placozoa (placozoans)
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
6231
Nematoda (roundworms)
2
FASTA
Subclassification
119089
Chromadorea
2
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
6239
Caenorhabditis elegans
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
4751
Fungi (fungi)
1
FASTA
Subclassification
4890
Ascomycota (ascomycetes)
1
FASTA
Taxonomic division of matching proteins
TaxId
Name
Protein count
Example proteins
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Q3TZX8
Nucleolar protein 9
ModBase
:
MB_Q3TZX8
109 - 357
ModBase
:
MB_Q3TZX8
299 - 548
ModBase
:
MB_Q3TZX8
109 - 357
ModBase
:
MB_Q3TZX8
299 - 548
SWISS-MODEL
:
SW_Q3TZX8
315 - 661
IPR012581
NUC156 533 - 667
Q54Z27
Nucleolar protein 9 homolog
SWISS-MODEL
:
SW_Q54Z27
270 - 641
IPR012581
NUC156 512 - 646
Q58711
Polyribonucleotide 5'-hydroxyl-kinase MJ1315
SWISS-MODEL
:
SW_Q58711
33 - 336
IPR012581
NUC156 306 - 336
Q5SY16
Nucleolar protein 9
ModBase
:
MB_Q5SY16
274 - 638
IPR012581
NUC156 516 - 650
More proteins
Example Proteins Key
InterPro entry accession number/name and structure databases
Colour code
IPR012581
NUC156
SWISS-MODEL
ModBase
Publications
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1.
Staub E, Fiziev P, Rosenthal A, Hinzmann B.
Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire.
Bioessays 26 567-81 2004
[PubMed: 15112237]
http://dx.doi.org/10.1002/bies.20032
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