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InterPro: IPR012332 Phage P22 tailspike

Protein matchesHelp
UniProtKB
Matches:
1256 proteins
AccessionHelp IPR012332 P22_tailspike
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR011050 Pectin lyase fold/virulence factor
Children IPR015331 Bacteriophage P22, tailspike
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The tailspike protein of Salmonella bacteriophage P22 is a viral adhesion protein that mediates attachment of the viral protein to host cell-surface lipopolysaccharide. The tailspike protein displays both receptor binding and destroying properties, inactivating the receptor by endoglycosidase activity. P22 tailspike is a homotrimer composed of 666 amino acid polypeptide chains. P22 tailspike consists of three main structural elements: the head-binding domain at the N terminus (IPR009093), the beta-helix in the centre of the protein, and the beta-prism and caudal fin at the C terminus [1]. The P22 tailspike protein contains similar structural elements to pectin lyase [2]. The binding of the disaccharide product occurs within a positively charged cleft formed by loops extending from the surface of the beta-helix structure. Amino acid residues responsible for recognition of the disaccharide, as well as potential catalytic residues, have been identified [3]. This entry represents the family of phage P22 tailspike proteins, and includes proteins that display a similar pectin-lyase-type beta-helix fold.

Structural linksHelp
SCOP: b.80.1.6 , b.80.1.7
CATH: 2.160.20.20

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR012332 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O32591 Serine protease espP

P12528 Bifunctional tail protein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR005546 Autotransporter beta-domain
IPR006315 Outer membrane autotransporter barrel
IPR006626 Parallel beta-helix repeat
IPR009003 Serine/cysteine peptidase, trypsin-like
IPR012332 Phage P22 tailspike
IPR000710 Peptidase S6, IgA endopeptidase
IPR015331 Bacteriophage P22, tailspike
IPR011050 Pectin lyase fold/virulence factor
IPR009093 Phage P22 tailspike protein, head-binding
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Gage MJ, Robinson AS.
C-terminal hydrophobic interactions play a critical role in oligomeric assembly of the P22 tailspike trimer.
Protein Sci. 12 2732-47 2003 [PubMed: 14627734]
http://dx.doi.org/10.1110/ps.03150303
2. Huang W, Matte A, Li Y, Kim YS, Linhardt RJ, Su H, Cygler M.
Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
J. Mol. Biol. 294 1257-69 1999 [PubMed: 10600383]
http://dx.doi.org/10.1006/jmbi.1999.3292
3. Pojasek K, Raman R, Kiley P, Venkataraman G, Sasisekharan R.
Biochemical characterization of the chondroitinase B active site.
J. Biol. Chem. 277 31179-86 2002 [PubMed: 12063249]
http://dx.doi.org/10.1074/jbc.M201552200

Additional ReadingHelp
Baxa U, Steinbacher S, Weintraub A, Huber R, Seckler R.
Mutations improving the folding of phage P22 tailspike protein affect its receptor binding activity.
J. Mol. Biol. 293 1999 693-701 [PubMed: 10543960]
http://dx.doi.org/10.1006/jmbi.1999.3165
Steinbacher S, Seckler R, Miller S, Steipe B, Huber R, Reinemer P.
Crystal structure of P22 tailspike protein: interdigitated subunits in a thermostable trimer.
Science 265 1994 383-6 [PubMed: 8023158]
http://www.sciencemag.org/cgi/content/abstract/265/5170/383
Emsley P, Charles IG, Fairweather NF, Isaacs NW.
Structure of Bordetella pertussis virulence factor P.69 pertactin.
Nature 381 1996 90-2 [PubMed: 8609998]
http://dx.doi.org/10.1038/381090a0
Schuler B, Furst F, Osterroth F, Steinbacher S, Huber R, Seckler R.
Plasticity and steric strain in a parallel beta-helix: rational mutations in the P22 tailspike protein.
Proteins 39 2000 89-101 [PubMed: 10737931]
http://dx.doi.org/10.1002/(SICI)1097-0134(20000401)39:1<89::AID-PROT10>3.3.CO;2-H
Steinbacher S, Baxa U, Miller S, Weintraub A, Seckler R, Huber R.
Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors.
Proc. Natl. Acad. Sci. U.S.A. 93 1996 10584-8 [PubMed: 8855221]
http://dx.doi.org/10.1073/pnas.93.20.10584
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InterPro 23.1