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InterPro: IPR012131 Histidinol dehydrogenase, prokaryotic-type

Protein matchesHelp
UniProtKB
Matches:
1681 proteins
AccessionHelp IPR012131 Hstdl_DH_prok-type
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR016161 Aldehyde/histidinol dehydrogenase
Found in IPR016298 Histidine biosynthesis trifunctional-protein
Contains IPR001692 Histidinol dehydrogenase, conserved site
GO Term annotationHelp
Process GO:0000105 histidine biosynthetic process
Function GO:0004399 histidinol dehydrogenase activity
GO:0008270 zinc ion binding
GO:0051287 NAD or NADH binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine.

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His [1]. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules [1]. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme [1]. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step [1].

In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [2].

This group represents prokaryotic and plant histidinol dehydrogenases [3, 4].

Structural linksHelp
SCOP: c.82.1.2
Database linksHelp
Enzyme: EC:1.1.1.23
Pfam Clan: CL0099.9

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR012131 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P00815 Histidine biosynthesis trifunctional protein

P06988 Histidinol dehydrogenase

P72946 Putative histidinol dehydrogenase 2

Q5NAY4 Histidinol dehydrogenase, chloroplastic

Q9C5U8 Histidinol dehydrogenase, chloroplastic

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR016298 Histidine biosynthesis trifunctional-protein
IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase
IPR002496 Phosphoribosyl-AMP cyclohydrolase
IPR012131 Histidinol dehydrogenase, prokaryotic-type
IPR016161 Aldehyde/histidinol dehydrogenase
IPR001692 Histidinol dehydrogenase, conserved site
SWISS-MODEL
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Grubmeyer CT, Gray WR.
A cysteine residue (cysteine-116) in the histidinol binding site of histidinol dehydrogenase.
Biochemistry 25 4778-84 1986 [PubMed: 3533140]
http://dx.doi.org/10.1021/bi00365a009
2. Nagai A, Ward E, Beck J, Tada S, Chang JY, Scheidegger A, Ryals J.
Structural and functional conservation of histidinol dehydrogenase between plants and microbes.
Proc. Natl. Acad. Sci. U.S.A. 88 4133-7 1991 [PubMed: 2034659]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=2034659&action=stream&blobtype=pdf
3. Cowan-Jacob SW, Rahuel J, Nagai A, Iwasaki G, Ohta D.
Crystallization and preliminary crystallographic analysis of cabbage histidinol dehydrogenase.
Acta Crystallogr. D Biol. Crystallogr. 52 1188-90 1996 [PubMed: 15299582]
http://dx.doi.org/10.1107/S0907444996008396
4. Barbosa JA, Sivaraman J, Li Y, Larocque R, Matte A, Schrag JD, Cygler M.
Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc. Natl. Acad. Sci. U.S.A. 99 1859-64 2002 [PubMed: 11842181]
http://dx.doi.org/10.1073/pnas.022476199

Additional ReadingHelp
Legerton TL, Yanofsky C.
Cloning and characterization of the multifunctional his-3 gene of Neurospora crassa.
Gene 39 1985 129-40 [PubMed: 3005109]
http://dx.doi.org/10.1016/0378-1119(85)90306-3
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InterPro 23.1