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InterPro: IPR011989 Armadillo-like helical
Protein matches
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UniProtKB Matches: 13672 proteins |
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Accession
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IPR011989 ARM-like |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR016024 Armadillo-type fold
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Found in
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IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR004908 ATPase, V1 complex, subunit H
IPR006911 Protein of unknown function DUF634
IPR007673 Non-SMC condensin subunit, XCAP-D2/Cnd1
IPR008658 Kinesin-associated
IPR008665 LRV FeS4 cluster
IPR011959 Conserved hypothetical protein CHP02270
IPR013284 Beta-catenin
IPR016342 Adaptor protein complex, beta subunit
IPR016460 Coatomer, beta subunit
IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
IPR017104 Adaptor protein complex AP-2, alpha subunit
IPR017105 Adaptor protein complex AP-3, delta subunit
IPR017106 Coatomer, gamma subunit
IPR017107 Adaptor protein complex AP-1, gamma subunit
IPR017108 Adaptor protein complex AP-3, beta subunit
IPR017109 Adaptor protein complex AP-4, epsilon subunit
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Contains
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IPR000225 Armadillo
IPR000357 HEAT
IPR001313 Pumilio RNA-binding repeat
IPR001494 Importin-beta, N-terminal
IPR004155 PBS lyase HEAT-like repeat
IPR004830 Leucine rich repeat variant
IPR005043 CAS/CSE, C-terminal
IPR007205 Uncharacterised protein family UPF0507
IPR007206 Uncharacterised protein family UPF0507, C-terminal
IPR013598 Exportin-1/Importin-beta-like
IPR013713 Exportin, Cse1-like
IPR013918 Nucleotide exchange factor Fes1
IPR013932 TATA-binding protein interacting (TIP20)
IPR014877 Exportin 1, C-terminal
IPR021133 HEAT, type 2
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GO Term annotation
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Function
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GO:0005488 binding
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InterPro annotation
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Entry Details in BioMart
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Abstract
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This domain consists of a multi-helical fold comprised of two curved layers of alpha helices arranged in a regular right-handed superhelix, where the repeats that make up this structure are arranged about a common axis [1]. These superhelical structures present an extensive solvent-accessible surface that is well suited to binding large substrates such as proteins and nucleic acids. This topology has been found with a number of repeats and domains, including the armadillo repeat (found in beta-catenins and importins), the HEAT repeat (found in protein phosphatase 2a and initiation factor eIF4G), the PHAT domain (found in Smaug RNA-binding protein), the leucine-rich repeat variant, the Pumilo repeat, and in the H regulatory subunit of V-type ATPases. The sequence similarity among these different repeats or domains is low, however they exhibit considerable structural similarity. Furthermore, the number of repeats present in the superhelical structure can vary between orthologues, indicating that rapid loss/gain of repeats has occurred frequently in evolution. A common phylogenetic origin has been proposed for the armadillo and HEAT repeats [2].
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Structural links
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Example proteins
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O14980 Exportin-1
O44326 Protein humpback-2
P16521 Elongation factor 3A
P17427 AP-2 complex subunit alpha-2
P25822 Maternal protein pumilio
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR008152 |
Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain |
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| IPR000225 |
Armadillo |
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| IPR013284 |
Beta-catenin |
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| IPR002553 |
Clathrin/coatomer adaptor, adaptin-like, N-terminal |
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| IPR013598 |
Exportin-1/Importin-beta-like |
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| IPR015688 |
Elongation Factor 3 |
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| IPR017871 |
ABC transporter, conserved site |
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| IPR017104 |
Adaptor protein complex AP-2, alpha subunit |
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| IPR015873 |
Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain |
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| IPR011989 |
Armadillo-like helical |
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| IPR001494 |
Importin-beta, N-terminal |
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| IPR009028 |
Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain |
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| IPR013038 |
Clathrin adaptor, alpha-adaptin, appendage, Ig-like subdomain |
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| IPR001313 |
Pumilio RNA-binding repeat |
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| IPR003593 |
ATPase, AAA+ type, core |
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| IPR003439 |
ABC transporter-like |
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| IPR016024 |
Armadillo-type fold |
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| IPR014877 |
Exportin 1, C-terminal |
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| IPR003164 |
Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain |
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| IPR013041 |
Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain |
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| IPR021133 |
HEAT, type 2 |
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ModBase |
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SWISS-MODEL |
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PDB Chain |
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CATH Domain |
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SCOP Domain |
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Additional Reading
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Gupta YK, Nair DT, Wharton RP, Aggarwal AK.
Structures of human Pumilio with noncognate RNAs reveal molecular mechanisms for binding promiscuity.
Structure 16 2008 549-57
[PubMed: 18328718]
http://dx.doi.org/10.1016/j.str.2008.01.006
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Xu Y, Chen Y, Zhang P, Jeffrey PD, Shi Y.
Structure of a protein phosphatase 2A holoenzyme: insights into B55-mediated Tau dephosphorylation.
Mol. Cell 31 2008 873-85
[PubMed: 18922469]
http://dx.doi.org/10.1016/j.molcel.2008.08.006
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Forwood JK, Lonhienne TG, Marfori M, Robin G, Meng W, Guncar G, Liu SM, Stewart M, Carroll BJ, Kobe B.
Kap95p binding induces the switch loops of RanGDP to adopt the GTP-bound conformation: implications for nuclear import complex assembly dynamics.
J. Mol. Biol. 383 2008 772-82
[PubMed: 18708071]
http://dx.doi.org/10.1016/j.jmb.2008.07.090
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Mitrousis G, Olia AS, Walker-Kopp N, Cingolani G.
Molecular basis for the recognition of snurportin 1 by importin beta.
J. Biol. Chem. 283 2008 7877-84
[PubMed: 18187419]
http://dx.doi.org/10.1074/jbc.M709093200
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Tarendeau F, Boudet J, Guilligay D, Mas PJ, Bougault CM, Boulo S, Baudin F, Ruigrok RW, Daigle N, Ellenberg J, Cusack S, Simorre JP, Hart DJ.
Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunit.
Nat. Struct. Mol. Biol. 14 2007 229-33
[PubMed: 17310249]
http://dx.doi.org/10.1038/nsmb1212
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