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InterPro: IPR011904 Acetate--CoA ligase

Protein matchesHelp
UniProtKB
Matches:
1217 proteins
AccessionHelp IPR011904 Ac_CoA_lig_AcsA
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR000873 AMP-dependent synthetase/ligase
IPR020845 AMP-binding, conserved site
GO Term annotationHelp
Function GO:0003987 acetate-CoA ligase activity
GO:0016208 AMP binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) is a ubiquitous enzyme, found in both prokaryotes and eukaryotes, which catalyses the formation of acetyl-CoA from acetate, coenzyme A (CoA) and ATP as shown below [1]:

ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA

The activity of this enzyme is crucial for maintaining the required levels of acetyl-CoA, a key intermediate in many important biosynthetic and catabolic processes. It is especially important in eukayotic species as it is the only route for the activation of acetate to acetyl-CoA in these organisms (some prokaryotic species can also activate acetate by either acetate kinase/phosphotransacetylase or by ADP-forming acetyl-CoA synthase). Eukaryotes typically have two isoforms of acetyl-CoA synthase, a cytosolic form involved in biosynthetic processes and a mitochondrial form primarily involved in energy generation.

The crystal structures of a eukaryotic (Q01574, from yeast) and bacterial (Q8ZKF6, from Salmonella) form of this enzyme have been determined [2, 3]. The yeast enzyme is trimeric, while the bacterial enzyme is monomeric. The trimeric state of the yeast protein may be unique to this organism however, as the residues involved in the trimer interface are poorly conserved in other sequences. Despite differences in the oligomeric state of the two enzyme, the structures of the monomers are almost identical. A large N-terminal domain (~500 residues) containing two parallel beta sheets is followed by a small (~110 residues) C-terminal domain containing a three-stranded beta sheet with helices. The active site occurs at the domain interface, with its contents determining the orientation of the C-terminal domain.

Structural linksHelp
SCOP: e.23.1.1
Database linksHelp
Enzyme: EC:6.2.1.1

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR011904 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
Q01574 Acetyl-coenzyme A synthetase 1

Q55404 Acetyl-coenzyme A synthetase

Q99NB1 Acetyl-coenzyme A synthetase 2-like, mitochondrial

Q9NUB1 Acetyl-coenzyme A synthetase 2-like, mitochondrial

Q9VP61 Acetyl-coenzyme A synthetase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR011904 Acetate--CoA ligase
IPR020845 AMP-binding, conserved site
IPR000873 AMP-dependent synthetase/ligase
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp
1. Starai VJ, Escalante-Semerena JC.
Acetyl-coenzyme A synthetase (AMP forming).
Cell. Mol. Life Sci. 61 2020-30 2004 [PubMed: 15316652]
http://dx.doi.org/10.1007/s00018-004-3448-x
2. Jogl G, Tong L.
Crystal structure of yeast acetyl-coenzyme A synthetase in complex with AMP.
Biochemistry 43 1425-31 2004 [PubMed: 14769018]
http://dx.doi.org/10.1021/bi035911a
3. Gulick AM, Starai VJ, Horswill AR, Homick KM, Escalante-Semerena JC.
The 1.75 A crystal structure of acetyl-CoA synthetase bound to adenosine-5'-propylphosphate and coenzyme A.
Biochemistry 42 2866-73 2003 [PubMed: 12627952]
http://dx.doi.org/10.1021/bi0271603

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InterPro 23.1