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InterPro: IPR011098 G5

Protein matchesHelp
UniProtKB
Matches:
745 proteins
AccessionHelp IPR011098 G5
TypeHelp Domain
SignaturesHelp
GO Term annotationHelp
Function GO:0016787 hydrolase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The G5 domain (named after its conserved glycine residues) is a module of ~80 residues that is found in a variety of enzymes such as Streptococcal IgA peptidases and various glycosyl hydrolases in bacteria. It is found in one to seven copies in association with other domains, such as LysM, bacterial Ig-like, M23 and M26 peptidases, F5/8 type C, vanW or transglycosylase-like. The G5 domain contains a few highly conserved residues. None of these conserved residues are the polar types of amino acids found in active sites, so it seems unlikely this region has an enzymatic function. However, in nearly all cases the G5 domain is associated with a known enzymatic domain. Therefore, the G5 domain may confer localization or substrate specificity on the proteins in which it is found. As a common feature of the proteins containing G5 domains is N-acetylglucosamine binding, it has been suggested that this function might be attributed to the G5 domain. Other alternative functions could be allosteric regulation of the enzymatic domain or cofactor binding [1].

Structural linksHelp
CATH: 1.10.530.10
Database linksHelp
PROSITE doc: PDOC51109
PANDIT: PF07501
Blocks: IPB011098
MEROPS: M26

Taxonomic coverageHelp

Example proteinsHelp
P37546 Uncharacterized protein yabE

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR007137 Protein of unknown function DUF348
IPR010611 3D
IPR011098 G5
SWISS-MODEL
ModBase

PublicationsHelp
1. Bateman A, Holden MT, Yeats C.
The G5 domain: a potential N-acetylglucosamine recognition domain involved in biofilm formation.
Bioinformatics 21 1301-3 2005 [PubMed: 15598841]
http://dx.doi.org/10.1093/bioinformatics/bti206

Additional ReadingHelp
Cohen-Gonsaud M, Barthe P, Bagneris C, Henderson B, Ward J, Roumestand C, Keep NH.
The structure of a resuscitation-promoting factor domain from Mycobacterium tuberculosis shows homology to lysozymes.
Nat. Struct. Mol. Biol. 12 2005 270-3 [PubMed: 15723078]
http://dx.doi.org/10.1038/nsmb905
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InterPro 23.1