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InterPro: IPR011042 Six-bladed beta-propeller, TolB-like
Protein matches
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UniProtKB Matches: 9724 proteins |
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Accession
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IPR011042 6-blade_b-propeller_TolB-like |
Type
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Domain |
Signatures
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InterPro Relationships
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Children
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IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR013658 SMP-30/Gluconolaconase/LRE-like region
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Found in
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IPR000720 Peptidyl-glycine alpha-amidating monooxygenase
IPR002640 Arylesterase
IPR004141 Strictosidine synthase
IPR008363 Paraoxonase1
IPR008364 Paraoxonase2
IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB
IPR016317 Pro-epidermal growth factor
IPR017049 Low density lipoprotein receptor-related protein, 5/6
IPR017549 Conserved hypothetical protein CHP03118
IPR020738 Tyrosine-protein kinase, receptor ROS/Sevenless
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Contains
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IPR000033 Low-density lipoprotein receptor, class B (YWTD) repeat
IPR001258 NHL repeat
IPR010620 Beta-propeller
IPR011659 WD40-like Beta Propeller
IPR012938 Glucose sorbosone dehydrogenase
IPR013017 NHL repeat, subgroup
IPR018119 Strictosidine synthase, conserved region
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InterPro annotation
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Entry Details in BioMart
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Abstract
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This entry represents a six-bladed beta-propeller domain consisting of six 4-stranded beta-sheet motifs. This domain can be found in TolB proteins (C-terminal), in soluble quinoprotein glucose dehydrogenase, in calcium-dependent phosphotriesterases, in the low density lipoprotein (LDL) receptor YWTD domain, in nidogen, and in serine/threonine-protein kinase (PknD) NHL repeat domain.
TolB is a periplasmic protein from Escherichia coli that is part of the Tol-dependent translocation system involving group A and E colicins that is used to penetrate and kill cells [1, 2]. TolB has two domains, an alpha-helical N-terminal domain (IPR007195) that shares structural similarity with the C-terminal domain of transfer RNA ligases, and a beta-propeller C-terminal domain that shares structural similarity with numerous members of the prolyl oligopeptidase family and, to a lesser extent, to class B metallo-beta-lactamases (although its does not necessarily occur at the C-terminal in these proteins) [1]. The C-terminal domain of TolB may mediate protein-protein interactions with colicins.
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Structural links
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Example proteins
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A6ZPJ1 Eukaryotic translation initiation factor 3 subunit B
O01811 Mechanosensory abnormality protein 6
P01130 Low-density lipoprotein receptor
P01132 Pro-epidermal growth factor
Q8MQJ9 Brain tumor protein
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR001258 |
NHL repeat |
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| IPR013979 |
Eukaryotic translation initiation factor 2A, central region |
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| IPR013091 |
EGF calcium-binding |
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| IPR002172 |
Low density lipoprotein-receptor, class A (cysteine-rich) repeat |
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| IPR006210 |
EGF-like |
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| IPR000504 |
RNA recognition motif, RNP-1 |
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| IPR013017 |
NHL repeat, subgroup |
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| IPR013032 |
EGF-like region, conserved site |
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| IPR018097 |
EGF-like calcium-binding, conserved site |
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| IPR001881 |
EGF-like calcium-binding |
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| IPR016317 |
Pro-epidermal growth factor |
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| IPR000315 |
Zinc finger, B-box |
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| IPR012677 |
Nucleotide-binding, alpha-beta plait |
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| IPR011042 |
Six-bladed beta-propeller, TolB-like |
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| IPR000033 |
Low-density lipoprotein receptor, class B (YWTD) repeat |
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| IPR011400 |
Translation initiation factor eIF-3b |
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| IPR000152 |
EGF-type aspartate/asparagine hydroxylation site |
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| IPR000742 |
EGF-like, type 3 |
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| IPR001336 |
EGF, type 1 |
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| IPR002640 |
Arylesterase |
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| IPR006209 |
EGF |
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ModBase |
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SWISS-MODEL |
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PDB Chain |
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CATH Domain |
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SCOP Domain |
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Publications
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1.
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Abergel C, Bouveret E, Claverie JM, Brown K, Rigal A, Lazdunski C, Benedetti H.
Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 A resolution.
Structure 7 1291-300 1999
[PubMed: 10545334]
http://dx.doi.org/10.1016/S0969-2126(00)80062-3
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2.
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Carr S, Penfold CN, Bamford V, James R, Hemmings AM.
The structure of TolB, an essential component of the tol-dependent translocation system, and its protein-protein interaction with the translocation domain of colicin E9.
Structure 8 57-66 2000
[PubMed: 10673426]
http://dx.doi.org/10.1016/S0969-2126(00)00079-4
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Additional Reading
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Katsemi V, Lucke C, Koepke J, Lohr F, Maurer S, Fritzsch G, Ruterjans H.
Mutational and structural studies of the diisopropylfluorophosphatase from Loligo vulgaris shed new light on the catalytic mechanism of the enzyme.
Biochemistry 44 2005 9022-33
[PubMed: 15966726]
http://dx.doi.org/10.1021/bi0500675
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Loftus SR, Walker D, Mate MJ, Bonsor DA, James R, Moore GR, Kleanthous C.
Competitive recruitment of the periplasmic translocation portal TolB by a natively disordered domain of colicin E9.
Proc. Natl. Acad. Sci. U.S.A. 103 2006 12353-8
[PubMed: 16894158]
http://dx.doi.org/10.1073/pnas.0603433103
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Tanaka Y, Morikawa K, Ohki Y, Yao M, Tsumoto K, Watanabe N, Ohta T, Tanaka I.
Structural and mutational analyses of Drp35 from Staphylococcus aureus: a possible mechanism for its lactonase activity.
J. Biol. Chem. 282 2007 5770-80
[PubMed: 17166853]
http://dx.doi.org/10.1074/jbc.M607340200
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Bonsor DA, Grishkovskaya I, Dodson EJ, Kleanthous C.
Molecular mimicry enables competitive recruitment by a natively disordered protein.
J. Am. Chem. Soc. 129 2007 4800-7
[PubMed: 17375930]
http://dx.doi.org/10.1021/ja070153n
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Blum MM, Lohr F, Richardt A, Ruterjans H, Chen JC.
Binding of a designed substrate analogue to diisopropyl fluorophosphatase: implications for the phosphotriesterase mechanism.
J. Am. Chem. Soc. 128 2006 12750-7
[PubMed: 17002369]
http://dx.doi.org/10.1021/ja061887n
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InterPro 23.1
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