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InterPro: IPR011042 Six-bladed beta-propeller, TolB-like

Protein matchesHelp
UniProtKB
Matches:
9724 proteins
AccessionHelp IPR011042 6-blade_b-propeller_TolB-like
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Children IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR013658 SMP-30/Gluconolaconase/LRE-like region
Found in IPR000720 Peptidyl-glycine alpha-amidating monooxygenase
IPR002640 Arylesterase
IPR004141 Strictosidine synthase
IPR008363 Paraoxonase1
IPR008364 Paraoxonase2
IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB
IPR016317 Pro-epidermal growth factor
IPR017049 Low density lipoprotein receptor-related protein, 5/6
IPR017549 Conserved hypothetical protein CHP03118
IPR020738 Tyrosine-protein kinase, receptor ROS/Sevenless
Contains IPR000033 Low-density lipoprotein receptor, class B (YWTD) repeat
IPR001258 NHL repeat
IPR010620 Beta-propeller
IPR011659 WD40-like Beta Propeller
IPR012938 Glucose sorbosone dehydrogenase
IPR013017 NHL repeat, subgroup
IPR018119 Strictosidine synthase, conserved region
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This entry represents a six-bladed beta-propeller domain consisting of six 4-stranded beta-sheet motifs. This domain can be found in TolB proteins (C-terminal), in soluble quinoprotein glucose dehydrogenase, in calcium-dependent phosphotriesterases, in the low density lipoprotein (LDL) receptor YWTD domain, in nidogen, and in serine/threonine-protein kinase (PknD) NHL repeat domain.

TolB is a periplasmic protein from Escherichia coli that is part of the Tol-dependent translocation system involving group A and E colicins that is used to penetrate and kill cells [1, 2]. TolB has two domains, an alpha-helical N-terminal domain (IPR007195) that shares structural similarity with the C-terminal domain of transfer RNA ligases, and a beta-propeller C-terminal domain that shares structural similarity with numerous members of the prolyl oligopeptidase family and, to a lesser extent, to class B metallo-beta-lactamases (although its does not necessarily occur at the C-terminal in these proteins) [1]. The C-terminal domain of TolB may mediate protein-protein interactions with colicins.

Structural linksHelp
CATH: 2.120.10.30

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR011042 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
A6ZPJ1 Eukaryotic translation initiation factor 3 subunit B

O01811 Mechanosensory abnormality protein 6

P01130 Low-density lipoprotein receptor

P01132 Pro-epidermal growth factor

Q8MQJ9 Brain tumor protein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR001258 NHL repeat
IPR013979 Eukaryotic translation initiation factor 2A, central region
IPR013091 EGF calcium-binding
IPR002172 Low density lipoprotein-receptor, class A (cysteine-rich) repeat
IPR006210 EGF-like
IPR000504 RNA recognition motif, RNP-1
IPR013017 NHL repeat, subgroup
IPR013032 EGF-like region, conserved site
IPR018097 EGF-like calcium-binding, conserved site
IPR001881 EGF-like calcium-binding
IPR016317 Pro-epidermal growth factor
IPR000315 Zinc finger, B-box
IPR012677 Nucleotide-binding, alpha-beta plait
IPR011042 Six-bladed beta-propeller, TolB-like
IPR000033 Low-density lipoprotein receptor, class B (YWTD) repeat
IPR011400 Translation initiation factor eIF-3b
IPR000152 EGF-type aspartate/asparagine hydroxylation site
IPR000742 EGF-like, type 3
IPR001336 EGF, type 1
IPR002640 Arylesterase
IPR006209 EGF
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Abergel C, Bouveret E, Claverie JM, Brown K, Rigal A, Lazdunski C, Benedetti H.
Structure of the Escherichia coli TolB protein determined by MAD methods at 1.95 A resolution.
Structure 7 1291-300 1999 [PubMed: 10545334]
http://dx.doi.org/10.1016/S0969-2126(00)80062-3
2. Carr S, Penfold CN, Bamford V, James R, Hemmings AM.
The structure of TolB, an essential component of the tol-dependent translocation system, and its protein-protein interaction with the translocation domain of colicin E9.
Structure 8 57-66 2000 [PubMed: 10673426]
http://dx.doi.org/10.1016/S0969-2126(00)00079-4

Additional ReadingHelp
Katsemi V, Lucke C, Koepke J, Lohr F, Maurer S, Fritzsch G, Ruterjans H.
Mutational and structural studies of the diisopropylfluorophosphatase from Loligo vulgaris shed new light on the catalytic mechanism of the enzyme.
Biochemistry 44 2005 9022-33 [PubMed: 15966726]
http://dx.doi.org/10.1021/bi0500675
Loftus SR, Walker D, Mate MJ, Bonsor DA, James R, Moore GR, Kleanthous C.
Competitive recruitment of the periplasmic translocation portal TolB by a natively disordered domain of colicin E9.
Proc. Natl. Acad. Sci. U.S.A. 103 2006 12353-8 [PubMed: 16894158]
http://dx.doi.org/10.1073/pnas.0603433103
Tanaka Y, Morikawa K, Ohki Y, Yao M, Tsumoto K, Watanabe N, Ohta T, Tanaka I.
Structural and mutational analyses of Drp35 from Staphylococcus aureus: a possible mechanism for its lactonase activity.
J. Biol. Chem. 282 2007 5770-80 [PubMed: 17166853]
http://dx.doi.org/10.1074/jbc.M607340200
Bonsor DA, Grishkovskaya I, Dodson EJ, Kleanthous C.
Molecular mimicry enables competitive recruitment by a natively disordered protein.
J. Am. Chem. Soc. 129 2007 4800-7 [PubMed: 17375930]
http://dx.doi.org/10.1021/ja070153n
Blum MM, Lohr F, Richardt A, Ruterjans H, Chen JC.
Binding of a designed substrate analogue to diisopropyl fluorophosphatase: implications for the phosphotriesterase mechanism.
J. Am. Chem. Soc. 128 2006 12750-7 [PubMed: 17002369]
http://dx.doi.org/10.1021/ja061887n
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InterPro 23.1