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InterPro: IPR011040 Neuraminidase
Protein matches
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UniProtKB Matches: 17467 proteins |
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Accession
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IPR011040 Neuraminidase |
Type
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Domain |
Signatures
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InterPro Relationships
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Found in
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IPR000665 Haemagglutinin-neuraminidase glycoprotein
IPR001860 Glycoside hydrolase, family 34
IPR008377 Trypanosome sialidase
IPR016285 Haemagglutinin-neuraminidase, paramyxovirus
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Contains
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IPR002860 BNR repeat
IPR015344 Vibrio cholerae sialidase, lectin insertion
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Neuraminidases (sialidases) hydrolyse the non-reducing, terminal sialic acid linkage in various natural substrates, such as glycoproteins, glycolipids, gangliosides, and polysaccharides [1]. In mammals, neuraminidases occur in the lysosome, the cytosol, and associated with the plasma membrane. Neuraminidases have also been implicated in the pathogenesis of many diseases. For example, in viruses neuraminidases enable the transport of the virus through mucin, the eruption of the virus from the infected host cell, and the prevention of self-aggregation of virus particles through the destruction of the host cell receptor recognised by the virus [2]. Eukaryotic, bacterial and viral neuraminidases share highly conserved regions of beta-sheet motifs. Bacterial neuraminidases often possess domains in addition to the catalytic neuraminidase domain, for instance the neuraminidase from Micromonospora viridifaciens contains three domains, of which the catalytic domain described here is the N-terminal domain [3]. Similarly, leech neuraminidase is a multidomain protein, where the catalytic domain is the C-terminal domain [4]. In several paramyxoviruses, neuraminidase forms part of the multi-functional haemagglutinin-neuraminidase glycoprotein found on the viral envelope [5].
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Structural links
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Database links
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Publications
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1.
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Monti E, Preti A, Venerando B, Borsani G.
Recent development in mammalian sialidase molecular biology.
Neurochem. Res. 27 649-63 2002
[PubMed: 12374200]
http://dx.doi.org/10.1023/A:1020276000901
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2.
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Johansson BE, Brett IC.
Variation in the divalent cation requirements of influenza a virus N2 neuraminidases.
J. Biochem. 134 345-52 2003
[PubMed: 14561719]
http://dx.doi.org/10.1093/jb/mvg151
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3.
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Gaskell A, Crennell S, Taylor G.
The three domains of a bacterial sialidase: a beta-propeller, an immunoglobulin module and a galactose-binding jelly-roll.
Structure 3 1197-205 1995
[PubMed: 8591030]
http://dx.doi.org/10.1016/S0969-2126(01)00255-6
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4.
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Luo Y, Li SC, Li YT, Luo M.
The 1.8 A structures of leech intramolecular trans-sialidase complexes: evidence of its enzymatic mechanism.
J. Mol. Biol. 285 323-32 1999
[PubMed: 9878409]
http://dx.doi.org/10.1006/jmbi.1998.2345
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5.
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Lawrence MC, Borg NA, Streltsov VA, Pilling PA, Epa VC, Varghese JN, McKimm-Breschkin JL, Colman PM.
Structure of the haemagglutinin-neuraminidase from human parainfluenza virus type III.
J. Mol. Biol. 335 1343-57 2004
[PubMed: 14729348]
http://dx.doi.org/10.1016/j.jmb.2003.11.032
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Additional Reading
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Luo M.
Structural biology: antiviral drugs fit for a purpose.
Nature 443 2006 37-8
[PubMed: 16915238]
http://dx.doi.org/10.1038/nature05003
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Watts AG, Oppezzo P, Withers SG, Alzari PM, Buschiazzo A.
Structural and kinetic analysis of two covalent sialosyl-enzyme intermediates on Trypanosoma rangeli sialidase.
J. Biol. Chem. 281 2006 4149-55
[PubMed: 16298994]
http://dx.doi.org/10.1074/jbc.M510677200
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Smith BJ, Huyton T, Joosten RP, McKimm-Breschkin JL, Zhang JG, Luo CS, Lou MZ, Labrou NE, Garrett TP.
Structure of a calcium-deficient form of influenza virus neuraminidase: implications for substrate binding.
Acta Crystallogr. D Biol. Crystallogr. 62 2006 947-52
[PubMed: 16929094]
http://dx.doi.org/10.1107/S0907444906020063
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Venkatramani L, Bochkareva E, Lee JT, Gulati U, Graeme Laver W, Bochkarev A, Air GM.
An epidemiologically significant epitope of a 1998 human influenza virus neuraminidase forms a highly hydrated interface in the NA-antibody complex.
J. Mol. Biol. 356 2006 651-63
[PubMed: 16384583]
http://dx.doi.org/10.1016/j.jmb.2005.11.061
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Buchini S, Buschiazzo A, Withers SG.
A new generation of specific Trypanosoma cruzi trans-sialidase inhibitors.
Angew. Chem. Int. Ed. Engl. 47 2008 2700-3
[PubMed: 18300214]
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InterPro 23.1
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