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InterPro: IPR010905 Glycosyl hydrolase, family 88

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873 proteins

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Accession

IPR010905 Glyco_hydro_88

Type

Family

Signatures Help

Database	ID	Name	Proteins
Pfam	PF07470	Glyco_hydro_88	873
Signatures in BioMart

InterPro Relationships Help

Contains

IPR012341 Six-hairpin glycosidase

InterPro annotation

Entry Details in BioMart

Abstract

Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [1].

Structural links Help

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SCOP: a.102.1.6 , a.102.1.7

CATH: 1.50.10.10

Database links Help

PANDIT: PF07470

Pfam Clan: CL0059.11

Taxonomic coverage Help

Overlapping InterPro entries Help

IPR010905

Numbers of overlapping proteins

Average numbers of overlapping amino acids

Example proteins Help

O34559 Unsaturated rhamnogalacturonyl hydrolase yteR

More proteins

Example Proteins Key

InterPro entry accession number/name and structure databases		Colour code
IPR012341	Six-hairpin glycosidase
IPR008928	Six-hairpin glycosidase-like
IPR010905	Glycosyl hydrolase, family 88
	PDB Chain
	ModBase
	CATH Domain
	SCOP Domain

Publications Open in usermanual
1.	Mori S, Akao S, Miyake O, Nankai H, Hashimoto W, Mikami B, Murata K. Crystallization and preliminary X-ray analysis of a novel unsaturated glucuronyl hydrolase from Bacillus sp. GL1. Acta Crystallogr. D Biol. Crystallogr. 59 946-9 2003 [PubMed: 12777820] http://dx.doi.org/10.1107/S0907444903005912

Additional Reading Open in usermanual
	Itoh T, Ochiai A, Mikami B, Hashimoto W, Murata K. A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide. J. Mol. Biol. 360 2006 573-85 [PubMed: 16781735] http://dx.doi.org/10.1016/j.jmb.2006.04.047
	Itoh T, Hashimoto W, Mikami B, Murata K. Crystal structure of unsaturated glucuronyl hydrolase complexed with substrate: molecular insights into its catalytic reaction mechanism. J. Biol. Chem. 281 2006 29807-16 [PubMed: 16893885] http://dx.doi.org/10.1074/jbc.M604975200
	Itoh T, Ochiai A, Mikami B, Hashimoto W, Murata K. Structure of unsaturated rhamnogalacturonyl hydrolase complexed with substrate. Biochem. Biophys. Res. Commun. 347 2006 1021-9 [PubMed: 16870154] http://dx.doi.org/10.1016/j.bbrc.2006.07.034
	Itoh T, Hashimoto W, Mikami B, Murata K. Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1. Biochem. Biophys. Res. Commun. 344 2006 253-62 [PubMed: 16630576] http://dx.doi.org/10.1016/j.bbrc.2006.03.141
	Zhang R, Minh T, Lezondra L, Korolev S, Moy SF, Collart F, Joachimiak A. 1.6 A crystal structure of YteR protein from Bacillus subtilis, a predicted lyase. Proteins 60 2005 561-5 [PubMed: 15906318] http://dx.doi.org/10.1002/prot.20410

InterPro 23.1