EBI Databases InterPro	Search Open in usermanual InterPro:
Jump to: InterProScan Databases Documentation FTP site Help Click on the icon for context sensitive help from the user manual. Advanced search

InterPro: IPR010702 Periplasmic pectate lyase

Protein matches Help

UniProtKB

Matches:

75 proteins

Overview:	sorted by AC,	sorted by name,	of known structure,	proteins with splice variants
Detailed:	sorted by AC,	sorted by name,	of known structure	proteins with splice variants
Table:	For all matching proteins,	of known structure
Architectures
Accession List
Matches in BioMart

Accession

IPR010702 Pectate_lyase_2

Type

Family

Signatures Help

Database	ID	Name	Proteins
Pfam	PF06917	Pectate_lyase_2	75
PIRSF	PIRSF001432	Pect_lyase	49
Signatures in BioMart

GO Term annotation Help

Process

GO:0045490 pectin catabolic process

Function

GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides

Component

GO:0005737 cytoplasm

InterPro annotation

Entry Details in BioMart

Abstract

This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [1].

Database links Help

Enzyme: EC:4.2.2

PANDIT: PF06917

Blocks: IPB010702

Taxonomic coverage Help

Example proteins Help

P11278 Periplasmic pectate lyase

More proteins

Example Proteins Key

InterPro entry accession number/name and structure databases		Colour code
IPR010702	Periplasmic pectate lyase
	SWISS-MODEL

Publications Open in usermanual
1.	Franza T, Michaud-Soret I, Piquerel P, Expert D. Coupling of iron assimilation and pectinolysis in Erwinia chrysanthemi 3937. Mol. Plant Microbe Interact. 15 1181-91 2002 [PubMed: 12423024]

Additional Reading Open in usermanual
	Lietzke SE, Scavetta RD, Yoder MD, Jurnak F. The Refined Three-Dimensional Structure of Pectate Lyase E from Erwinia chrysanthemi at 2.2 A Resolution. Plant Physiol. 111 1996 73-92 [PubMed: 12226275] http://www.plantphysiol.org/cgi/reprint/111/1/73.pdf
	Manulis S, Kobayashi DY, Keen NT. Molecular cloning and sequencing of a pectate lyase gene from Yersinia pseudotuberculosis. J. Bacteriol. 170 1988 1825-30 [PubMed: 2832382] http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=2832382&action=stream&blobtype=pdf

InterPro 23.1