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InterPro: IPR008922 Di-copper centre-containing

Protein matchesHelp
UniProtKB
Matches:
2861 proteins
AccessionHelp IPR008922 Di-copper_centre
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Children IPR000896 Hemocyanin, copper-containing
IPR002227 Tyrosinase
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Copper active sites play a major role in biological dioxygen activation. Oxygen intermediates have been studied in detail for the proteins and enzymes involved in reversible O(2) binding (hemocyanin), activation (tyrosinase), and four-electron reduction to water (multicopper oxidases). Tyrosinase binds two copper ions (CuA and CuB). Each of the two copper ions has been shown to be bound by three conserved histidines residues. The regions around these copper-binding ligands are well-conserved and also shared by some hemocyanins, which are copper-containing oxygen carriers from the hemolymph of many molluscs and arthropods [1].

Structural linksHelp
SCOP: a.86.1.1 , a.86.1.2

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR008922 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P06845 Tyrosinase

P07147 5,6-dihydroxyindole-2-carboxylic acid oxidase

P11995 Larval serum protein 1 alpha chain

P14679 Tyrosinase

P34269 Putative tyrosinase-like protein tyr-1

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR005203 Hemocyanin, C-terminal
IPR015563 Hemocyanin related larval storage protein arylphorin related
IPR005204 Hemocyanin, N-terminal
IPR000896 Hemocyanin, copper-containing
IPR015559 Dihydroxyindole-2-carboxylic acid oxidase
IPR014756 Immunoglobulin E-set
IPR013788 Arthropod hemocyanin/insect LSP
IPR008922 Di-copper centre-containing
IPR002227 Tyrosinase
IPR003582 Metridin-like ShK toxin
SWISS-MODEL
ModBase

PublicationsHelp
1. Solomon EI, Chen P, Metz M, Lee SK, Palmer AE.
Oxygen Binding, Activation, and Reduction to Water by Copper Proteins.
Angew. Chem. Int. Ed. Engl. 40 4570-4590 2001 [PubMed: 12404359]
http://dx.doi.org/10.1002/1521-3773(20011217)40:24<4570::AID-ANIE4570>3.0.CO;2-4

Additional ReadingHelp
Hazes B, Magnus KA, Bonaventura C, Bonaventura J, Dauter Z, Kalk KH, Hol WG.
Crystal structure of deoxygenated Limulus polyphemus subunit II hemocyanin at 2.18 A resolution: clues for a mechanism for allosteric regulation.
Protein Sci. 2 1993 597-619 [PubMed: 8518732]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=8518732&action=stream&blobtype=pdf
Klabunde T, Eicken C, Sacchettini JC, Krebs B.
Crystal structure of a plant catechol oxidase containing a dicopper center.
Nat. Struct. Biol. 5 1998 1084-90 [PubMed: 9846879]
http://dx.doi.org/10.1038/4193
Magnus KA, Hazes B, Ton-That H, Bonaventura C, Bonaventura J, Hol WG.
Crystallographic analysis of oxygenated and deoxygenated states of arthropod hemocyanin shows unusual differences.
Proteins 19 1994 302-9 [PubMed: 7984626]
http://dx.doi.org/10.1002/prot.340190405
Perbandt M, Guthohrlein EW, Rypniewski W, Idakieva K, Stoeva S, Voelter W, Genov N, Betzel C.
The structure of a functional unit from the wall of a gastropod hemocyanin offers a possible mechanism for cooperativity.
Biochemistry 42 2003 6341-6 [PubMed: 12767214]
http://dx.doi.org/10.1021/bi020672x
Cuff ME, Miller KI, van Holde KE, Hendrickson WA.
Crystal structure of a functional unit from Octopus hemocyanin.
J. Mol. Biol. 278 1998 855-70 [PubMed: 9614947]
http://dx.doi.org/10.1006/jmbi.1998.1647
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InterPro 23.1