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InterPro: IPR007886 Alanine dehydrogenase/PNT, N-terminal

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UniProtKB
Matches:
2137 proteins
AccessionHelp IPR007886 Ala_DH/PNT_N
TypeHelp Domain
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InterPro RelationshipsHelp
Found in IPR004571 NAD(P) transhydrogenase, alpha subunit
Contains IPR008142 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-1
GO Term annotationHelp
Process GO:0055114 oxidation reduction
Function GO:0016491 oxidoreductase activity
InterPro annotation
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AbstractHelp

Alanine dehydrogenases (EC:1.4.1.1) and pyridine nucleotide transhydrogenase (EC:1.6.1.1) have been shown to share regions of similarity [1]. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins, represented in this entry, and to a central glycine-rich region which is part of the NAD(H)-binding site.

Structural linksHelp
SCOP: c.23.12.2
Database linksHelp
Enzyme: EC:1
PANDIT: PF05222

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR007886 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P07001 NAD(P) transhydrogenase subunit alpha

P38998 Saccharopine dehydrogenase [NAD+, L-lysine-forming]

Q13423 NAD(P) transhydrogenase, mitochondrial

Q61941 NAD(P) transhydrogenase, mitochondrial

Q9SMZ4 Alpha-aminoadipic semialdehyde synthase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2
IPR008142 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-1
IPR007886 Alanine dehydrogenase/PNT, N-terminal
IPR004003 NAD(P) transhydrogenase, beta subunit
IPR005097 Saccharopine dehydrogenase
IPR016040 NAD(P)-binding domain
IPR004571 NAD(P) transhydrogenase, alpha subunit
IPR007698 Alanine dehydrogenase/PNT, C-terminal
IPR007545 LOR/SDH bifunctional enzyme, conserved domain
PDB Chain
ModBase
CATH Domain
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Delforge D, Depiereux E, De Bolle X, Feytmans E, Remacle J.
Similarities between alanine dehydrogenase and the N-terminal part of pyridine nucleotide transhydrogenase and their possible implication in the virulence mechanism of Mycobacterium tuberculosis.
Biochem. Biophys. Res. Commun. 190 1073-9 1993 [PubMed: 8439307]
http://dx.doi.org/10.1006/bbrc.1993.1158

Additional ReadingHelp
Sundaresan V, Chartron J, Yamaguchi M, Stout CD.
Conformational diversity in NAD(H) and interacting transhydrogenase nicotinamide nucleotide binding domains.
J. Mol. Biol. 346 2005 617-29 [PubMed: 15670609]
http://dx.doi.org/10.1016/j.jmb.2004.11.070
Singh A, Venning JD, Quirk PG, van Boxel GI, Rodrigues DJ, White SA, Jackson JB.
Interactions between transhydrogenase and thio-nicotinamide Analogues of NAD(H) and NADP(H) underline the importance of nucleotide conformational changes in coupling to proton translocation.
J. Biol. Chem. 278 2003 33208-16 [PubMed: 12791694]
http://dx.doi.org/10.1074/jbc.M303061200
Bhakta T, Whitehead SJ, Snaith JS, Dafforn TR, Wilkie J, Rajesh S, White SA, Jackson JB.
Structures of the dI2dIII1 complex of proton-translocating transhydrogenase with bound, inactive analogues of NADH and NADPH reveal active site geometries.
Biochemistry 46 2007 3304-18 [PubMed: 17323922]
http://dx.doi.org/10.1021/bi061843r
Mather OC, Singh A, van Boxel GI, White SA, Jackson JB.
Active-site conformational changes associated with hydride transfer in proton-translocating transhydrogenase.
Biochemistry 43 2004 10952-64 [PubMed: 15323555]
http://dx.doi.org/10.1021/bi0497594
Azevedo RA, Lea PJ.
Lysine metabolism in higher plants.
Amino Acids 20 2001 261-79 [PubMed: 11354603]
http://dx.doi.org/10.1007/s007260170043
Brondijk TH, van Boxel GI, Mather OC, Quirk PG, White SA, Jackson JB.
The role of invariant amino acid residues at the hydride transfer site of proton-translocating transhydrogenase.
J. Biol. Chem. 281 2006 13345-54 [PubMed: 16533815]
http://dx.doi.org/10.1074/jbc.M513230200
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InterPro 23.1