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InterPro: IPR007535 Catechol dioxygenase, N-terminal

Protein matchesHelp
UniProtKB
Matches:
505 proteins
AccessionHelp IPR007535 Catechol_dOase_N
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR012800 Catechol 1,2-dioxygenase, actinobacteria
IPR012801 Catechol 1,2-dioxygenase, proteobacteria
IPR012817 Chlorocatechol 1,2-dioxygenase
IPR015889 Intradiol ring-cleavage dioxygenase, core
GO Term annotationHelp
Process GO:0009712 catechol metabolic process
GO:0055114 oxidation reduction
Function GO:0005506 iron ion binding
GO:0018576 catechol 1,2-dioxygenase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This domain is the N-terminal region of catechol, chlorocatechol or hydroxyquinol 1,2-dioxygenase proteins. This region is always found adjacent to the dioxygenase domain (IPR000627).

Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes (IPR000486) use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) [1]. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues.

Enzymes that belong to the intradiol family include catechol 1,2-dioxygenase (1,2-CTD) (EC:1.13.11.1); protocatechuate 3,4-dioxygenase (3,4-PCD) (EC:1.13.11.3); and chlorocatechol 1,2-dioxygenase (EC:1.13.11.1) [2].

Structural linksHelp
SCOP: b.3.6.1
CATH: 2.60.130.10
Database linksHelp
Enzyme: EC:1.13.11
PANDIT: PF04444
Blocks: IPB007535

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR007535 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O67987 Chlorocatechol 1,2-dioxygenase

P86029 Catechol 1,2-dioxygenase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR012817 Chlorocatechol 1,2-dioxygenase
IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal
IPR015889 Intradiol ring-cleavage dioxygenase, core
IPR007535 Catechol dioxygenase, N-terminal
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp
1. Broderick JB.
Catechol dioxygenases.
Essays Biochem. 34 173-89 1999 [PubMed: 10730195]
2. Ferraroni M, Solyanikova IP, Kolomytseva MP, Scozzafava A, Golovleva L, Briganti F.
Crystal structure of 4-chlorocatechol 1,2-dioxygenase from the chlorophenol-utilizing gram-positive Rhodococcus opacus 1CP.
J. Biol. Chem. 279 27646-55 2004 [PubMed: 15060064]
http://dx.doi.org/10.1074/jbc.M401692200

Additional ReadingHelp
Vetting MW, Ohlendorf DH.
The 1.8 A crystal structure of catechol 1,2-dioxygenase reveals a novel hydrophobic helical zipper as a subunit linker.
Structure 8 2000 429-40 [PubMed: 10801478]
http://dx.doi.org/10.1016/S0969-2126(00)00122-2
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InterPro 23.1