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InterPro: IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site
Protein matches
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UniProtKB Matches: 2092 proteins |
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Accession
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IPR006066 NO2/SO3_Rdtase_FeS/sirohaem_BS |
Secondary
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IPR000660
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Type
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Binding_site |
Signatures
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InterPro Relationships
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Found in
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IPR006067 Nitrite/sulphite reductase 4Fe-4S domain
IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit
IPR011787 Sulphite reductase, ferredoxin dependent
IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB
IPR014261 Sulphite reductase, subunit C
IPR017121 Nitrite reductase [NAD(P)H], large subunit
IPR017220 Sulphite reductase, assimilatory
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GO Term annotation
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Process
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GO:0055114 oxidation reduction
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Function
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GO:0016491 oxidoreductase activity
GO:0020037 heme binding
GO:0051536 iron-sulfur cluster binding
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Nitrite reductases and bacterial sulphite reductases catalyse the 6-electron reduction of nitrite (sulphite) to
ammonia (sulphide) [1, 2]. On the basis of physiological function, 2 types of nitrite
reductase can be defined: the assimilatory type, which is involved in nitrate assimilation (denitrification);
and the dissimilatory type, which is responsible for nitrate respiration function. Assimilatory nitrite
reductases contain a prosthetic group termed sirohaem (an iron tetra-hydroporphyrin of the isobacteriochlorin
type, with 8 carboxylic acid-containing peripheral sidechains), and an iron-sulphur cluster. Similarly, there
are 2 types of sulphite reductase: the assimilatory type, which participate in the synthesis of
sulphur-containing compounds; and the dissimilatory type, which are terminal reductases in the reduction of sulphate.
Assimilatory sulphite reductases can catalyse 6-electron reduction without the formation of free intermediates,
while dissimilatory reductases can produce trithionate and thiosulphate in addition to sulphide. Both types of
reductase contain sirohaem and iron-sulphur clusters [1]. A region of sequence similarity, about 80
amino acids long, is shared by assimilatory nitrite [2] and sulphite reductases [3,
4]. Four conserved Cys residues are suggested to be involved in binding the sirohaem group and/or the
iron-sulphur centre [4].
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Structural links
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Database links
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Additional Reading
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Schnell R, Sandalova T, Hellman U, Lindqvist Y, Schneider G.
Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis is a sulfite reductase with a covalent Cys-Tyr bond in the active site.
J. Biol. Chem. 280 2005 27319-28
[PubMed: 15917234]
http://dx.doi.org/10.1074/jbc.M502560200
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Swamy U, Wang M, Tripathy JN, Kim SK, Hirasawa M, Knaff DB, Allen JP.
Structure of spinach nitrite reductase: implications for multi-electron reactions by the iron-sulfur:siroheme cofactor.
Biochemistry 44 2005 16054-63
[PubMed: 16331965]
http://dx.doi.org/10.1021/bi050981y
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Crane BR, Siegel LM, Getzoff ED.
Structures of the siroheme- and Fe4S4-containing active center of sulfite reductase in different states of oxidation: heme activation via reduction-gated exogenous ligand exchange.
Biochemistry 36 1997 12101-19
[PubMed: 9315848]
http://dx.doi.org/10.1021/bi971065q
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Gisselmann G, Klausmeier P, Schwenn JD.
The ferredoxin:sulphite reductase gene from Synechococcus PCC7942.
Biochim. Biophys. Acta 1144 1993 102-6
[PubMed: 8347657]
http://dx.doi.org/10.1016/0005-2728(93)90037-G
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Crane BR, Siegel LM, Getzoff ED.
Sulfite reductase structure at 1.6 A: evolution and catalysis for reduction of inorganic anions.
Science 270 1995 59-67
[PubMed: 7569952]
http://www.sciencemag.org/cgi/content/abstract/270/5233/59
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Crane BR, Siegel LM, Getzoff ED.
Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products.
Biochemistry 36 1997 12120-37
[PubMed: 9315849]
http://dx.doi.org/10.1021/bi971066i
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InterPro 23.1
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