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InterPro: IPR005076 Glycosyl transferase, family 6

Protein matchesHelp
UniProtKB
Matches:
359 proteins
AccessionHelp IPR005076 Glyco_trans_6
TypeHelp Family
SignaturesHelp
GO Term annotationHelp
Process GO:0005975 carbohydrate metabolic process
Function GO:0016758 transferase activity, transferring hexosyl groups
Component GO:0016020 membrane
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (EC:2.4.1.-) and related proteins into distinct sequence based families has been described [1]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [2]. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'.

Glycosyltransferase family 6 GT6 comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (EC:2.4.1.151); alpha-1,3 N-acetylgalactosaminyltransferase (EC:2.4.1.40); alpha-galactosyltransferase (EC:2.4.1.37).

Structural linksHelp
PDB - click here
SCOP: c.68.1.9
CATH: 3.90.550.10
Database linksHelp
Enzyme: EC:2.4.1
CAZy: GT6
PANDIT: PF03414
Blocks: IPB005076
Pfam Clan: CL0110.8

Taxonomic coverageHelp

Example proteinsHelp
P14769 N-acetyllactosaminide alpha-1,3-galactosyltransferase

P16442 Histo-blood group ABO system transferase

P23336 N-acetyllactosaminide alpha-1,3-galactosyltransferase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR005076 Glycosyl transferase, family 6
SWISS-MODEL
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Campbell JA, Davies GJ, Bulone V, Henrissat B.
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities.
Biochem. J. 326 ( Pt 3) 929-39 1997 [PubMed: 9334165]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=9334165
2. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999

Additional ReadingHelp
Alfaro JA, Zheng RB, Persson M, Letts JA, Polakowski R, Bai Y, Borisova SN, Seto NO, Lowary TL, Palcic MM, Evans SV.
ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J. Biol. Chem. 283 2008 10097-108 [PubMed: 18192272]
http://dx.doi.org/10.1074/jbc.M708669200
Jamaluddin H, Tumbale P, Withers SG, Acharya KR, Brew K.
Conformational changes induced by binding UDP-2F-galactose to alpha-1,3 galactosyltransferase- implications for catalysis.
J. Mol. Biol. 369 2007 1270-81 [PubMed: 17493636]
http://dx.doi.org/10.1016/j.jmb.2007.04.012
Persson M, Letts JA, Hosseini-Maaf B, Borisova SN, Palcic MM, Evans SV, Olsson ML.
Structural effects of naturally occurring human blood group B galactosyltransferase mutations adjacent to the DXD motif.
J. Biol. Chem. 282 2007 9564-70 [PubMed: 17259183]
http://dx.doi.org/10.1074/jbc.M610998200
Tumbale P, Jamaluddin H, Thiyagarajan N, Brew K, Acharya KR.
Structural basis of UDP-galactose binding by alpha-1,3-galactosyltransferase (alpha3GT): role of negative charge on aspartic acid 316 in structure and activity.
Biochemistry 47 2008 8711-8 [PubMed: 18651752]
http://dx.doi.org/10.1021/bi800852a
Hosseini-Maaf B, Letts JA, Persson M, Smart E, LePennec PY, Hustinx H, Zhao Z, Palcic MM, Evans SV, Chester MA, Olsson ML.
Structural basis for red cell phenotypic changes in newly identified, naturally occurring subgroup mutants of the human blood group B glycosyltransferase.
Transfusion 47 2007 864-75 [PubMed: 17465952]
http://dx.doi.org/10.1111/j.1537-2995.2007.01203.x
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InterPro 23.1