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InterPro: IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN

Protein matchesHelp
UniProtKB
Matches:
741 proteins
AccessionHelp IPR004558 HemN
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR006638 Elongator protein 3/MiaB/NifB
IPR010723 HemN, C-terminal
GO Term annotationHelp
Process GO:0006779 porphyrin biosynthetic process
GO:0055114 oxidation reduction
Function GO:0004109 coproporphyrinogen oxidase activity
Component GO:0005737 cytoplasm
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This family represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. HemN catalyses the anaerobic transformation of coproporhyrinogen-III into protoporphyrinogen-IX during porphyrin biosynthesis. Several species, including Escherichia coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity, IPR004559. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterised protein.

Structural linksHelp
SCOP: c.1.28.2
Database linksHelp
Enzyme: EC:1.3.99.22
COMe: PRX001235

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR004558 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P32131 Oxygen-independent coproporphyrinogen-III oxidase

P74132 Oxygen-independent coproporphyrinogen-III oxidase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR010723 HemN, C-terminal
IPR007197 Radical SAM
IPR006638 Elongator protein 3/MiaB/NifB
IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp

Additional ReadingHelp
Layer G, Moser J, Heinz DW, Jahn D, Schubert WD.
Crystal structure of coproporphyrinogen III oxidase reveals cofactor geometry of Radical SAM enzymes.
EMBO J. 22 2003 6214-24 [PubMed: 14633981]
http://dx.doi.org/10.1093/emboj/cdg598
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InterPro 23.1