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InterPro: IPR004139 Glycosyl transferase, family 13

Protein matchesHelp
UniProtKB
Matches:
165 proteins
AccessionHelp IPR004139 Glyco_trans_13
TypeHelp Family
SignaturesHelp
GO Term annotationHelp
Process GO:0006487 protein amino acid N-linked glycosylation
Function GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
Component GO:0000139 Golgi membrane
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (EC:2.4.1.-) and related proteins into distinct sequence based families has been described [1]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [2]. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'.

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) EC:2.4.1.101 transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus [3]. These proteins are members of the glycosyl transferase family 13 (GH13)

Structural linksHelp
SCOP: c.68.1.10
Database linksHelp
Enzyme: EC:2.4.1
CAZy: GH13
PANDIT: PF03071
Blocks: IPB004139
Pfam Clan: CL0110.8

Taxonomic coverageHelp

Example proteinsHelp
P26572 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

P27115 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

P27808 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

Q11068 Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

Q9XGM8 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR004139 Glycosyl transferase, family 13
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Campbell JA, Davies GJ, Bulone V, Henrissat B.
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities.
Biochem. J. 326 ( Pt 3) 929-39 1997 [PubMed: 9334165]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=9334165
2. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
3. Strasser R, Mucha J, Schwihla H, Altmann F, Glossl J, Steinkellner H.
Molecular cloning and characterization of cDNA coding for beta1, 2N-acetylglucosaminyltransferase I (GlcNAc-TI) from Nicotiana tabacum.
Glycobiology 9 779-85 1999 [PubMed: 10406843]
http://dx.doi.org/10.1093/glycob/9.8.779

Additional ReadingHelp
Unligil UM, Zhou S, Yuwaraj S, Sarkar M, Schachter H, Rini JM.
X-ray crystal structure of rabbit N-acetylglucosaminyltransferase I: catalytic mechanism and a new protein superfamily.
EMBO J. 19 2000 5269-80 [PubMed: 11032794]
http://dx.doi.org/10.1093/emboj/19.20.5269
Gordon RD, Sivarajah P, Satkunarajah M, Ma D, Tarling CA, Vizitiu D, Withers SG, Rini JM.
X-ray crystal structures of rabbit N-acetylglucosaminyltransferase I (GnT I) in complex with donor substrate analogues.
J. Mol. Biol. 360 2006 67-79 [PubMed: 16769084]
http://dx.doi.org/10.1016/j.jmb.2006.04.058
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InterPro 23.1