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InterPro: IPR004112 Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
Protein matches
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UniProtKB Matches: 2962 proteins |
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Accession
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IPR004112 Fum_Rdtase/Succ_DH_flav_C |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal
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Found in
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IPR005288 L-aspartate oxidase
IPR005884 Fumarate reductase, flavoprotein subunit
IPR011280 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria
IPR011281 Succinate dehydrogenase, flavoprotein subunit
IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
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GO Term annotation
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Process
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GO:0055114 oxidation reduction
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Function
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GO:0016491 oxidoreductase activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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In bacteria two distinct, membrane-bound, enzyme complexes are responsible for
the interconversion of fumarate and succinate (EC:1.3.99.1): fumarate
reductase (Frd) is used in anaerobic growth, and succinate dehydrogenase (Sdh)
is used in aerobic growth. Both complexes consist of two main components: a
membrane-extrinsic component composed of a FAD-binding flavoprotein and an
iron-sulphur protein; and an hydrophobic component composed of a membrane
anchor protein and/or a cytochrome B.
In eukaryotes mitochondrial succinate dehydrogenase (ubiquinone) (EC:1.3.5.1)
is an enzyme composed of two subunits: a FAD flavoprotein and and iron-sulphur
protein.
The flavoprotein subunit is a protein of about 60 to 70 Kd to which FAD is
covalently bound to a histidine residue which is located in the N-terminal
section of the protein [1]. The sequence around that histidine is well
conserved in Frd and Sdh from various bacterial and eukaryotic species [2].
This family includes members that bind FAD such as the flavoprotein subunits from
succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate
reductase.
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Structural links
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Database links
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Example proteins
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P31040 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
P47052 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial
Q09508 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Q8K2B3 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Q94523 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR015939 |
Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal |
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| IPR014006 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| IPR004112 |
Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal |
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| IPR013027 |
FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| IPR011281 |
Succinate dehydrogenase, flavoprotein subunit |
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| IPR003952 |
Fumarate reductase/succinate dehydrogenase, FAD-binding site |
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| IPR003953 |
Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal |
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SWISS-MODEL |
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ModBase |
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Publications
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1.
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Blaut M, Whittaker K, Valdovinos A, Ackrell BA, Gunsalus RP, Cecchini G.
Fumarate reductase mutants of Escherichia coli that lack covalently bound flavin.
J. Biol. Chem. 264 13599-604 1989
[PubMed: 2668268]
http://intl.jbc.org/cgi/reprint/264/23/13599.pdf
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2.
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Birch-Machin MA, Farnsworth L, Ackrell BA, Cochran B, Jackson S, Bindoff LA, Aitken A, Diamond AG, Turnbull DM.
The sequence of the flavoprotein subunit of bovine heart succinate dehydrogenase.
J. Biol. Chem. 267 11553-8 1992
[PubMed: 1375942]
http://intl.jbc.org/cgi/reprint/267/16/11553.pdf
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Additional Reading
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Tomasiak TM, Maklashina E, Cecchini G, Iverson TM.
A threonine on the active site loop controls transition state formation in Escherichia coli respiratory complex II.
J. Biol. Chem. 283 2008 15460-8
[PubMed: 18385138]
http://dx.doi.org/10.1074/jbc.M801372200
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Lancaster CR, Sauer US, Gross R, Haas AH, Graf J, Schwalbe H, Mantele W, Simon J, Madej MG.
Experimental support for the "E pathway hypothesis" of coupled transmembrane e- and H+ transfer in dihemic quinol:fumarate reductase.
Proc. Natl. Acad. Sci. U.S.A. 102 2005 18860-5
[PubMed: 16380425]
http://dx.doi.org/10.1073/pnas.0509711102
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Madej MG, Nasiri HR, Hilgendorff NS, Schwalbe H, Lancaster CR.
Evidence for transmembrane proton transfer in a dihaem-containing membrane protein complex.
EMBO J. 25 2006 4963-70
[PubMed: 17024183]
http://dx.doi.org/10.1038/sj.emboj.7601361
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Maklashina E, Iverson TM, Sher Y, Kotlyar V, Andrell J, Mirza O, Hudson JM, Armstrong FA, Rothery RA, Weiner JH, Cecchini G.
Fumarate reductase and succinate oxidase activity of Escherichia coli complex II homologs are perturbed differently by mutation of the flavin binding domain.
J. Biol. Chem. 281 2006 11357-65
[PubMed: 16484232]
http://dx.doi.org/10.1074/jbc.M512544200
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Iverson TM, Luna-Chavez C, Cecchini G, Rees DC.
Structure of the Escherichia coli fumarate reductase respiratory complex.
Science 284 1999 1961-6
[PubMed: 10373108]
http://dx.doi.org/10.1126/science.284.5422.1961
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Yankovskaya V, Horsefield R, Tornroth S, Luna-Chavez C, Miyoshi H, Leger C, Byrne B, Cecchini G, Iwata S.
Architecture of succinate dehydrogenase and reactive oxygen species generation.
Science 299 2003 700-4
[PubMed: 12560550]
http://dx.doi.org/10.1126/science.1079605
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InterPro 23.1
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