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InterPro: IPR003949 Potassium channel, voltage-dependent, EAG

Protein matchesHelp
UniProtKB
Matches:
59 proteins
AccessionHelp IPR003949 K_chnl_volt-dep_EAG
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR000014 PAS
IPR000595 Cyclic nucleotide-binding
IPR000700 PAS-associated, C-terminal
IPR001610 PAC motif
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 Ion transport
IPR013767 PAS fold
IPR014710 RmlC-like jelly roll fold
IPR018490 Cyclic nucleotide-binding-like
GO Term annotationHelp
Process GO:0006813 potassium ion transport
Function GO:0005249 voltage-gated potassium channel activity
Component GO:0016020 membrane
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Potassium channels are the most diverse group of the ion channel family [1, 2]. They are important in shaping the action potential, and in neuronal excitability and plasticity [3]. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups [4]: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group.

These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers [5]. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes [6]. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis [7].

All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) [7, 8]. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels.

The first EAG K+ channel was identified in Drosophila melanogaster (Fruit fly), following a screen for mutations giving rise to behavioural abnormalities. Disruption of the Eag gene caused an ether-induced, leg-shaking behaviour. Subsequent studies have revealed a conserved multi-gene family of EAG-like K+ channels, which are present in human and many other species. Based on the varying functional properties of the channels, the family has been divided into 3 subfamilies: EAG, ELK and ERG. Interestingly, Caenorhabditis elegans appears to lack the ELK type [9].

The EAG subfamily has been expressed in heterologous systems to reveal their biophysical and pharmacological functions and to determine their currents in native tissues. All mammalian EAG subfamily K+ channels that have been identified have properties typical of delayed rectifiers, with no measurable inactivation [10]. Only the Drosophila melanogaster Eag channel exhibits partial inactivation.

Database linksHelp
Blocks: IPB003949

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR003949 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O18965 Potassium voltage-gated channel subfamily H member 1

O95259 Potassium voltage-gated channel subfamily H member 1

Q02280 Potassium voltage-gated channel protein eag

Q60603 Potassium voltage-gated channel subfamily H member 1

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013767 PAS fold
IPR003949 Potassium channel, voltage-dependent, EAG
IPR000700 PAS-associated, C-terminal
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR000595 Cyclic nucleotide-binding
IPR014710 RmlC-like jelly roll fold
IPR001610 PAC motif
IPR000014 PAS
IPR018490 Cyclic nucleotide-binding-like
IPR005821 Ion transport
SWISS-MODEL
ModBase

PublicationsHelp
1. Perney TM, Kaczmarek LK.
The molecular biology of K+ channels.
Curr. Opin. Cell Biol. 3 663-70 1991 [PubMed: 1772658]
http://dx.doi.org/10.1016/0955-0674(91)90039-2
2. Luneau C, Wiedmann R, Smith JS, Williams JB.
Shaw-like rat brain potassium channel cDNA's with divergent 3' ends.
FEBS Lett. 288 163-7 1991 [PubMed: 1879548]
http://dx.doi.org/10.1016/0014-5793(91)81026-5
3. Tempel BL, Jan YN, Jan LY.
Cloning of a probable potassium channel gene from mouse brain.
Nature 332 837-9 1988 [PubMed: 2451788]
http://dx.doi.org/10.1038/332837a0
4. Stuhmer W, Ruppersberg JP, Schroter KH, Sakmann B, Stocker M, Giese KP, Perschke A, Baumann A, Pongs O.
Molecular basis of functional diversity of voltage-gated potassium channels in mammalian brain.
EMBO J. 8 3235-44 1989 [PubMed: 2555158]
http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=2555158
5. Schwarz TL, Tempel BL, Papazian DM, Jan YN, Jan LY.
Multiple potassium-channel components are produced by alternative splicing at the Shaker locus in Drosophila.
Nature 331 137-42 1988 [PubMed: 2448635]
http://dx.doi.org/10.1038/331137a0
6. Attali B, Romey G, Honore E, Schmid-Alliana A, Mattei MG, Lesage F, Ricard P, Barhanin J, Lazdunski M.
Cloning, functional expression, and regulation of two K+ channels in human T lymphocytes.
J. Biol. Chem. 267 8650-7 1992 [PubMed: 1373731]
http://intl.jbc.org/cgi/content/abstract/267/12/8650
7. Miller C.
An overview of the potassium channel family.
Genome Biol. 1 REVIEWS0004 2000 [PubMed: 11178249]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=11178249&action=stream&blobtype=pdf
8. Ashcroft FM.
Voltage-gated K+ channels.
97-123 2000
9. Littleton JT, Ganetzky B.
Ion channels and synaptic organization: analysis of the Drosophila genome.
Neuron 26 35-43 2000 [PubMed: 10798390]
http://dx.doi.org/10.1016/S0896-6273(00)81135-6
10. Frings S, Brull N, Dzeja C, Angele A, Hagen V, Kaupp UB, Baumann A.
Characterization of ether-a-go-go channels present in photoreceptors reveals similarity to IKx, a K+ current in rod inner segments.
J. Gen. Physiol. 111 583-99 1998 [PubMed: 9524140]
http://intl.jgp.org/cgi/content/abstract/111/4/583

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InterPro 24.0