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InterPro: IPR003673 CoA-transferase family III
Protein matches
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UniProtKB Matches: 3511 proteins |
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Accession
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IPR003673 CoA-Trfase_fam_III |
Type
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Family |
Signatures
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InterPro Relationships
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Children
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IPR017659 Formyl-CoA transferase
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GO Term annotation
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Process
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GO:0008152 metabolic process
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Function
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GO:0003824 catalytic activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism:
- Family I consists of CoA-transferases for 3-oxoacids (EC:2.8.3.5, EC:2.8.3.6), short-chain fatty acids (EC:2.8.3.8, EC:2.8.3.9) and glutaconate (EC:2.8.3.12). Most use succinyl-CoA or acetyl-CoA as CoA donors.
- Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (EC:2.8.3.10, EC:2.8.3.11). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well.
- Family III consists of formyl-CoA:oxalate CoA-transferase [1], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [2], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [3], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase [4]. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner [5].
This entry represents family III CoA-transferases.
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Structural links
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Database links
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Publications
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1.
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Jonsson S, Ricagno S, Lindqvist Y, Richards NG.
Kinetic and mechanistic characterization of the formyl-CoA transferase from Oxalobacter formigenes.
J. Biol. Chem. 279 36003-12 2004
[PubMed: 15213226]
http://dx.doi.org/10.1074/jbc.M404873200
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2.
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Leutwein C, Heider J.
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase: an enzyme of the anaerobic toluene catabolic pathway in denitrifying bacteria.
J. Bacteriol. 183 4288-95 2001
[PubMed: 11418570]
http://dx.doi.org/10.1128/JB.183.14.4288-4295.2001
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3.
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Dickert S, Pierik AJ, Linder D, Buckel W.
The involvement of coenzyme A esters in the dehydration of (R)-phenyllactate to (E)-cinnamate by Clostridium sporogenes.
Eur. J. Biochem. 267 3874-84 2000
[PubMed: 10849007]
http://dx.doi.org/10.1046/j.1432-1327.2000.01427.x
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4.
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Rangarajan ES, Li Y, Iannuzzi P, Cygler M, Matte A.
Crystal structure of Escherichia coli crotonobetainyl-CoA: carnitine CoA-transferase (CaiB) and its complexes with CoA and carnitinyl-CoA.
Biochemistry 44 5728-38 2005
[PubMed: 15823031]
http://dx.doi.org/10.1021/bi047656f
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5.
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Heider J.
A new family of CoA-transferases.
FEBS Lett. 509 345-9 2001
[PubMed: 11749953]
http://dx.doi.org/10.1016/S0014-5793(01)03178-7
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Additional Reading
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Berthold CL, Toyota CG, Richards NG, Lindqvist Y.
Reinvestigation of the catalytic mechanism of formyl-CoA transferase, a class III CoA-transferase.
J. Biol. Chem. 283 2008 6519-29
[PubMed: 18162462]
http://dx.doi.org/10.1074/jbc.M709353200
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Gogos A, Gorman J, Shapiro L.
Structure of Escherichia coli YfdW, a type III CoA transferase.
Acta Crystallogr. D Biol. Crystallogr. 60 2004 507-11
[PubMed: 14993676]
http://dx.doi.org/10.1107/S0907444904000034
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Savolainen K, Bhaumik P, Schmitz W, Kotti TJ, Conzelmann E, Wierenga RK, Hiltunen JK.
Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis. Mutational and structural characterization of the active site and the fold.
J. Biol. Chem. 280 2005 12611-20
[PubMed: 15632186]
http://dx.doi.org/10.1074/jbc.M409704200
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Bhaumik P, Schmitz W, Hassinen A, Hiltunen JK, Conzelmann E, Wierenga RK.
The catalysis of the 1,1-proton transfer by alpha-methyl-acyl-CoA racemase is coupled to a movement of the fatty acyl moiety over a hydrophobic, methionine-rich surface.
J. Mol. Biol. 367 2007 1145-61
[PubMed: 17320106]
http://dx.doi.org/10.1016/j.jmb.2007.01.062
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InterPro 23.1
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