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InterPro: IPR003608 MIR
Protein matches
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UniProtKB Matches: 640 proteins |
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Accession
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IPR003608 MIR |
Type
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Domain |
Signatures
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InterPro Relationships
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Found in
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IPR000493 Inositol 1,4,5-trisphosphate-binding protein receptor
IPR013333 Ryanodine receptor, N-terminal
IPR015925 Ryanodine receptor-related
IPR016093 MIR motif
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GO Term annotation
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Component
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GO:0016020 membrane
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InterPro annotation
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Entry Details in BioMart
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Abstract
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The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (EC:2.4.1.109), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies.
Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules [1]. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) [2]. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.
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Structural links
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Database links
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Pfam Clan: CL0066.10
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Example proteins
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P11881 Inositol 1,4,5-trisphosphate receptor type 1
P21817 Ryanodine receptor 1
P29993 Inositol 1,4,5-trisphosphate receptor
P31382 Dolichyl-phosphate-mannose--protein mannosyltransferase 2
Q93ZE8 Stromal cell-derived factor 2-like protein
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR001870 |
B302 (SPRY)-like |
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| IPR011992 |
EF-hand-like domain |
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| IPR014821 |
Inositol 1,4,5-trisphosphate/ryanodine receptor |
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| IPR015925 |
Ryanodine receptor-related |
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| IPR009460 |
Ryanodine Receptor TM 4-6 |
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| IPR003032 |
Ryanodine receptor Ryr |
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| IPR000493 |
Inositol 1,4,5-trisphosphate-binding protein receptor |
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| IPR003608 |
MIR |
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| IPR000699 |
Intracellular calcium-release channel |
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| IPR005821 |
Ion transport |
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| IPR003877 |
SPla/RYanodine receptor SPRY |
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| IPR003342 |
Glycosyl transferase, family 39 |
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| IPR018355 |
SPla/RYanodine receptor subgroup |
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| IPR013333 |
Ryanodine receptor, N-terminal |
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| IPR016093 |
MIR motif |
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| IPR013662 |
RyR/IP3R Homology associated domain |
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PDB Chain |
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ModBase |
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CATH Domain |
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SWISS-MODEL |
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SCOP Domain |
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Publications
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1.
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Witcher DR, Kovacs RJ, Schulman H, Cefali DC, Jones LR.
Unique phosphorylation site on the cardiac ryanodine receptor regulates calcium channel activity.
J. Biol. Chem. 266 11144-52 1991
[PubMed: 1645727]
http://intl.jbc.org/cgi/reprint/266/17/11144.pdf
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2.
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Quane KA, Keating KE, Healy JM, Manning BM, Krivosic-Horber R, Krivosic I, Monnier N, Lunardi J, McCarthy TV.
Mutation screening of the RYR1 gene in malignant hyperthermia: detection of a novel Tyr to Ser mutation in a pedigree with associated central cores.
Genomics 23 236-9 1994
[PubMed: 7829078]
http://dx.doi.org/10.1006/geno.1994.1483
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Additional Reading
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Ponting CP.
Novel repeats in ryanodine and IP3 receptors and protein O-mannosyltransferases.
Trends Biochem. Sci. 25 2000 48-50
[PubMed: 10664581]
http://dx.doi.org/10.1016/S0968-0004(99)01513-3
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Bosanac I, Yamazaki H, Matsu-Ura T, Michikawa T, Mikoshiba K, Ikura M.
Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor.
Mol. Cell 17 2005 193-203
[PubMed: 15664189]
http://dx.doi.org/10.1016/j.molcel.2004.11.047
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Bosanac I, Alattia JR, Mal TK, Chan J, Talarico S, Tong FK, Tong KI, Yoshikawa F, Furuichi T, Iwai M, Michikawa T, Mikoshiba K, Ikura M.
Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Nature 420 2002 696-700
[PubMed: 12442173]
http://dx.doi.org/10.1038/nature01268
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InterPro 23.1
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