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InterPro: IPR003608 MIR

Protein matchesHelp
UniProtKB
Matches:
640 proteins
AccessionHelp IPR003608 MIR
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR000493 Inositol 1,4,5-trisphosphate-binding protein receptor
IPR013333 Ryanodine receptor, N-terminal
IPR015925 Ryanodine receptor-related
IPR016093 MIR motif
GO Term annotationHelp
Component GO:0016020 membrane
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (EC:2.4.1.109), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies.

Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules [1]. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) [2]. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.

Structural linksHelp
SCOP: b.42.6.1
CATH: 2.80.10.50
Database linksHelp
PANDIT: PF02815
Blocks: IPB003608
Pfam Clan: CL0066.10

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR003608 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P11881 Inositol 1,4,5-trisphosphate receptor type 1

P21817 Ryanodine receptor 1

P29993 Inositol 1,4,5-trisphosphate receptor

P31382 Dolichyl-phosphate-mannose--protein mannosyltransferase 2

Q93ZE8 Stromal cell-derived factor 2-like protein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR001870 B302 (SPRY)-like
IPR011992 EF-hand-like domain
IPR014821 Inositol 1,4,5-trisphosphate/ryanodine receptor
IPR015925 Ryanodine receptor-related
IPR009460 Ryanodine Receptor TM 4-6
IPR003032 Ryanodine receptor Ryr
IPR000493 Inositol 1,4,5-trisphosphate-binding protein receptor
IPR003608 MIR
IPR000699 Intracellular calcium-release channel
IPR005821 Ion transport
IPR003877 SPla/RYanodine receptor SPRY
IPR003342 Glycosyl transferase, family 39
IPR018355 SPla/RYanodine receptor subgroup
IPR013333 Ryanodine receptor, N-terminal
IPR016093 MIR motif
IPR013662 RyR/IP3R Homology associated domain
PDB Chain
ModBase
CATH Domain
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Witcher DR, Kovacs RJ, Schulman H, Cefali DC, Jones LR.
Unique phosphorylation site on the cardiac ryanodine receptor regulates calcium channel activity.
J. Biol. Chem. 266 11144-52 1991 [PubMed: 1645727]
http://intl.jbc.org/cgi/reprint/266/17/11144.pdf
2. Quane KA, Keating KE, Healy JM, Manning BM, Krivosic-Horber R, Krivosic I, Monnier N, Lunardi J, McCarthy TV.
Mutation screening of the RYR1 gene in malignant hyperthermia: detection of a novel Tyr to Ser mutation in a pedigree with associated central cores.
Genomics 23 236-9 1994 [PubMed: 7829078]
http://dx.doi.org/10.1006/geno.1994.1483

Additional ReadingHelp
Ponting CP.
Novel repeats in ryanodine and IP3 receptors and protein O-mannosyltransferases.
Trends Biochem. Sci. 25 2000 48-50 [PubMed: 10664581]
http://dx.doi.org/10.1016/S0968-0004(99)01513-3
Bosanac I, Yamazaki H, Matsu-Ura T, Michikawa T, Mikoshiba K, Ikura M.
Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor.
Mol. Cell 17 2005 193-203 [PubMed: 15664189]
http://dx.doi.org/10.1016/j.molcel.2004.11.047
Bosanac I, Alattia JR, Mal TK, Chan J, Talarico S, Tong FK, Tong KI, Yoshikawa F, Furuichi T, Iwai M, Michikawa T, Mikoshiba K, Ikura M.
Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Nature 420 2002 696-700 [PubMed: 12442173]
http://dx.doi.org/10.1038/nature01268
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InterPro 23.1