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InterPro: IPR003367 Thrombospondin, type 3-like repeat

Protein matchesHelp
UniProtKB
Matches:
946 proteins
AccessionHelp IPR003367 Thrombospondin_3-like_rpt
TypeHelp Repeat
SignaturesHelp
InterPro RelationshipsHelp
Children IPR017897 Thrombospondin, type 3 repeat
GO Term annotationHelp
Process GO:0007155 cell adhesion
Function GO:0005509 calcium ion binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Thrombospondins are multimeric multidomain glycoproteins that function at cell surfaces and in the extracellular matrix milieu. They act as regulators of cell interactions in vertebrates. They are divided into two subfamilies, A and B, according to their overall molecular organisation. The subgroup A proteins TSP-1 and -2 contain an N-terminal domain, a VWFC domain, three TSP1 repeats, three EGF-like domains, TSP3 repeats and a C-terminal domain. They are assembled as trimer. The subgroup B thrombospondins, designated TSP-3, -4, and COMP (cartilage oligomeric matrix protein, also designated TSP-5) are distinct in that they contain unique N-terminal regions, lack the VWFC domain and TSP1 repeats, contain four copies of EGF-like domains, and are assembled as pentamers [1]. EGF, TSP3 repeats and the C-terminal domain are thus the hallmark of a thrombospondin.

This entry represents the type 3 thrombospondin repreat, and releated repeats present in other types of protein.

Structural linksHelp
SCOP: g.75.1.1
CATH: 4.10.1080.10
Database linksHelp
PANDIT: PF02412
Blocks: IPB003367

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR003367 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O86488 Serine-aspartate repeat-containing protein D

P07996 Thrombospondin-1

P35444 Cartilage oligomeric matrix protein

Q04732 Calcium-binding acidic-repeat protein

Q9R0G6 Cartilage oligomeric matrix protein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR017897 Thrombospondin, type 3 repeat
IPR013091 EGF calcium-binding
IPR019931 LPXTG-motif cell wall anchor
IPR001007 von Willebrand factor, type C
IPR008454 Collagen-binding surface protein Cna-like, B-type domain
IPR006210 EGF-like
IPR003367 Thrombospondin, type 3-like repeat
IPR008085 Thrombospondin, type 1 repeat, subgroup
IPR013032 EGF-like region, conserved site
IPR001899 Surface protein from Gram-positive cocci
IPR011266 Fibrinogen-binding adhesin, fibrinogen-binding domain, bacterial
IPR018097 EGF-like calcium-binding, conserved site
IPR008859 Thrombospondin, C-terminal
IPR001881 EGF-like calcium-binding
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
IPR018247 EF-Hand 1, calcium-binding site
IPR008969 Carboxypeptidase-like, regulatory domain
IPR008966 Adhesion, bacterial
IPR011252 Fibrogen-binding, domain 1
IPR000742 EGF-like, type 3
IPR000884 Thrombospondin, type 1 repeat
IPR005877 YSIRK Gram-positive signal peptide
IPR003129 Laminin G, thrombospondin-type, N-terminal
IPR008985 Concanavalin A-like lectin/glucanase
IPR019948 Gram-positive anchor
IPR006209 EGF
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Adams JC.
Thrombospondins: multifunctional regulators of cell interactions.
Annu. Rev. Cell Dev. Biol. 17 25-51 2001 [PubMed: 11687483]
http://dx.doi.org/10.1146/annurev.cellbio.17.1.25

Additional ReadingHelp
Lawler J, Hynes RO.
The structure of human thrombospondin, an adhesive glycoprotein with multiple calcium-binding sites and homologies with several different proteins.
J. Cell Biol. 103 1986 1635-48 [PubMed: 2430973]
http://dx.doi.org/10.1083/jcb.103.5.1635
Kvansakul M, Adams JC, Hohenester E.
Structure of a thrombospondin C-terminal fragment reveals a novel calcium core in the type 3 repeats.
EMBO J. 23 2004 1223-33 [PubMed: 15014436]
http://dx.doi.org/10.1038/sj.emboj.7600166
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InterPro 23.1