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InterPro: IPR002460 Alpha-synuclein

Protein matchesHelp
UniProtKB
Matches:
39 proteins
AccessionHelp IPR002460 Synuclein_alpha
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR001058 Synuclein
GO Term annotationHelp
Process GO:0014059 regulation of dopamine secretion
Component GO:0005737 cytoplasm
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Synucleins are small, soluble proteins expressed primarily in neural tissue and in certain tumors [1, 2]. The family includes three known proteins: alpha-synuclein, beta-synuclein, and gamma-synuclein. All synucleins have in common a highly conserved alpha-helical lipid-binding motif with similarity to the class-A2 lipid-binding domains of the exchangeable apolipoproteins [3].

Synuclein family members are not found outside vertebrates, although they have some conserved structural similarity with plant 'late-embryo-abundant' proteins. The alpha- and beta-synuclein proteins are found primarily in brain tissue, where they are seen mainly in presynaptic terminals [4, 5]. The gamma-synuclein protein is found primarily in the peripheral nervous system and retina, but its expression in breast tumors [6] is a marker for tumor progression [7]. Normal cellular functions have not been determined for any of the synuclein proteins, although some data suggest a role in the regulation of membrane stability and/or turnover. Mutations in alpha-synuclein are associated with rare familial cases of early-onset Parkinson's disease, and the protein accumulates abnormally in Parkinson's disease, Alzheimer's disease, and several other neurodegenerative illnesses [8].

Synelfin from the zebra finch is a homologue of the human alpha-synuclein and may serve a novel function critical to the regulation of vertebrate neural plasticity [9]. It is regulated during the critical period for song learning.

Structural linksHelp
SCOP: h.7.1.1
CATH: 1.10.287.700
Database linksHelp
Blocks: IPB002460

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR002460 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O55042 Alpha-synuclein

P37377 Alpha-synuclein

P37840 Alpha-synuclein

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR002460 Alpha-synuclein
IPR001058 Synuclein
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Lavedan C.
The synuclein family.
Genome Res. 8 871-80 1998 [PubMed: 9750188]
http://www.genome.org/cgi/content/abstract/8/9/871
2. George JM.
The synucleins.
Genome Biol. 3 REVIEWS3002 2002 [PubMed: 11806835]
http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=11806835
3. Perrin RJ, Woods WS, Clayton DF, George JM.
Interaction of human alpha-Synuclein and Parkinson's disease variants with phospholipids. Structural analysis using site-directed mutagenesis.
J. Biol. Chem. 275 34393-8 2000 [PubMed: 10952980]
http://dx.doi.org/10.1074/jbc.M004851200
4. Iwai A, Masliah E, Yoshimoto M, Ge N, Flanagan L, de Silva HA, Kittel A, Saitoh T.
The precursor protein of non-A beta component of Alzheimer's disease amyloid is a presynaptic protein of the central nervous system.
Neuron 14 467-75 1995 [PubMed: 7857654]
http://dx.doi.org/10.1016/0896-6273(95)90302-X
5. Nakajo S, Shioda S, Nakai Y, Nakaya K.
Localization of phosphoneuroprotein 14 (PNP 14) and its mRNA expression in rat brain determined by immunocytochemistry and in situ hybridization.
Brain Res. Mol. Brain Res. 27 81-6 1994 [PubMed: 7877458]
http://dx.doi.org/10.1016/0169-328X(94)90187-2
6. Bruening W, Giasson BI, Klein-Szanto AJ, Lee VM, Trojanowski JQ, Godwin AK.
Synucleins are expressed in the majority of breast and ovarian carcinomas and in preneoplastic lesions of the ovary.
Cancer 88 2154-63 2000 [PubMed: 10813729]
http://dx.doi.org/10.1002/(SICI)1097-0142(20000501)88:9<2154::AID-CNCR23>3.3.CO;2-0
7. Ji H, Liu YE, Jia T, Wang M, Liu J, Xiao G, Joseph BK, Rosen C, Shi YE.
Identification of a breast cancer-specific gene, BCSG1, by direct differential cDNA sequencing.
Cancer Res. 57 759-64 1997 [PubMed: 9044857]
http://cancerres.aacrjournals.org/cgi/content/abstract/57/4/759
8. Goedert M.
Alpha-synuclein and neurodegenerative diseases.
Nat. Rev. Neurosci. 2 492-501 2001 [PubMed: 11433374]
http://dx.doi.org/10.1038/35081564
9. George JM, Jin H, Woods WS, Clayton DF.
Characterization of a novel protein regulated during the critical period for song learning in the zebra finch.
Neuron 15 361-72 1995 [PubMed: 7646890]
http://dx.doi.org/10.1016/0896-6273(95)90040-3

Additional ReadingHelp
Ulmer TS, Bax A, Cole NB, Nussbaum RL.
Structure and dynamics of micelle-bound human alpha-synuclein.
J. Biol. Chem. 280 2005 9595-603 [PubMed: 15615727]
http://dx.doi.org/10.1074/jbc.M411805200
Tobe T, Nakajo S, Tanaka A, Mitoya A, Omata K, Nakaya K, Tomita M, Nakamura Y.
Cloning and characterization of the cDNA encoding a novel brain-specific 14-kDa protein.
J. Neurochem. 59 1992 1624-9 [PubMed: 1402909]
http://dx.doi.org/10.1111/j.1471-4159.1992.tb10991.x
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InterPro 23.1