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InterPro: IPR002226 Catalase

Protein matchesHelp
UniProtKB
Matches:
1927 proteins
AccessionHelp IPR002226 Catalase
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR011614 Catalase, N-terminal
IPR018028 Catalase related subgroup
IPR020835 Catalase-like domain, haem-dependent
GO Term annotationHelp
Process GO:0006979 response to oxidative stress
GO:0055114 oxidation reduction
Function GO:0004096 catalase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Catalases (EC:1.11.1.6) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760) that are found in bacteria [1].

This entry represents the mono-functional, haem-containing catalases. Within a given species there can be different catalase isoforms, which sometimes have different subcellular locations. Most catalases exist as tetramers of 60-75 kD, where each subunit contains an active site haem group buried deep within the structure, but which is accessible from the surface through hydrophobic channels [2]. Some catalases contain NADPH as a cofactor, which functions to prevent the formation of inactive compound. Catalases are uniquely stable enzymes that are more resistant to pH, thermal denaturation and proteolysis than most enzymes, due to their very rigid, stable structure that is resistant to unfolding.

Catalases are mainly regulated by the oxidant status of a cell, but can also be regulated by the action of certain hormones, such as the neurohormone melatonin. Melatonin can increase the activity of various antioxidant enzymes and can also stimulate the expression of genes encoding these enzymes [3].

Structural linksHelp
PDB - click here
SCOP: e.5.1.1
Database linksHelp
PDBe-motif: PS00437 , PS00438
Enzyme: EC:1.11.1.6
PROSITE doc: PDOC00395
Blocks: IPB002226
COMe: PRX000428

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR002226 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O61235 Catalase-2

P04040 Catalase

P15202 Peroxisomal catalase A

P17336 Catalase

P24270 Catalase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR002226 Catalase
IPR018028 Catalase related subgroup
IPR020835 Catalase-like domain, haem-dependent
IPR011614 Catalase, N-terminal
IPR010582 Catalase-related immune responsive
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp
1. Chelikani P, Fita I, Loewen PC.
Diversity of structures and properties among catalases.
Cell. Mol. Life Sci. 61 192-208 2004 [PubMed: 14745498]
http://dx.doi.org/10.1007/s00018-003-3206-5
2. Safo MK, Musayev FN, Wu SH, Abraham DJ, Ko TP.
Structure of tetragonal crystals of human erythrocyte catalase.
Acta Crystallogr. D Biol. Crystallogr. 57 1-7 2001 [PubMed: 11134921]
http://dx.doi.org/10.1107/S0907444900013767
3. Reiter RJ, Tan DX, Osuna C, Gitto E.
Actions of melatonin in the reduction of oxidative stress. A review.
J. Biomed. Sci. 7 444-58 2000 [PubMed: 11060493]
http://dx.doi.org/10.1159/000025480

Additional ReadingHelp
Carpena X, Soriano M, Klotz MG, Duckworth HW, Donald LJ, Melik-Adamyan W, Fita I, Loewen PC.
Structure of the Clade 1 catalase, CatF of Pseudomonas syringae, at 1.8 A resolution.
Proteins 50 2003 423-36 [PubMed: 12557185]
http://dx.doi.org/10.1002/prot.10284
Loewen PC, Carpena X, Rovira C, Ivancich A, Perez-Luque R, Haas R, Odenbreit S, Nicholls P, Fita I.
Structure of Helicobacter pylori catalase, with and without formic acid bound, at 1.6 A resolution.
Biochemistry 43 2004 3089-103 [PubMed: 15023060]
http://dx.doi.org/10.1021/bi035663i
Murthy MR, Reid TJ 3rd, Sicignano A, Tanaka N, Rossmann MG.
Structure of beef liver catalase.
J. Mol. Biol. 152 1981 465-99 [PubMed: 7328661]
http://dx.doi.org/10.1016/0022-2836(81)90254-0
Andreoletti P, Sainz G, Jaquinod M, Gagnon J, Jouve HM.
High-resolution structure and biochemical properties of a recombinant Proteus mirabilis catalase depleted in iron.
Proteins 50 2003 261-71 [PubMed: 12486720]
http://dx.doi.org/10.1002/prot.10283
Hakansson KO, Brugna M, Tasse L.
The three-dimensional structure of catalase from Enterococcus faecalis.
Acta Crystallogr. D Biol. Crystallogr. 60 2004 1374-80 [PubMed: 15272159]
http://dx.doi.org/10.1107/S0907444904012004
Alfonso-Prieto M, Borovik A, Carpena X, Murshudov G, Melik-Adamyan W, Fita I, Rovira C, Loewen PC.
The structures and electronic configuration of compound I intermediates of Helicobacter pylori and Penicillium vitale catalases determined by X-ray crystallography and QM/MM density functional theory calculations.
J. Am. Chem. Soc. 129 2007 4193-205 [PubMed: 17358056]
http://dx.doi.org/10.1021/ja063660y
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InterPro 23.1