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InterPro: IPR002201 Glycosyl transferase, family 9

Protein matchesHelp
UniProtKB
Matches:
2549 proteins
AccessionHelp IPR002201 Glyco_trans_9
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Children IPR011908 Lipopolysaccharide heptosyltransferase I
IPR011910 Lipopolysaccharide heptosyltransferase II
IPR011916 Lipopolysaccharide heptosyltransferase III, putative
GO Term annotationHelp
Process GO:0008152 metabolic process
Function GO:0016740 transferase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (EC:2.4.1.-) and related proteins into distinct sequence based families has been described [1]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [2]. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'.

Glycosyltransferase family 9 GT9 comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (EC:2.4.1.56), heptosyltransferase (EC:2.4).

Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core [3]. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide [4]. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [3].

Structural linksHelp
SCOP: c.87.1.7
CATH: 3.40.50.2000
Database linksHelp
Enzyme: EC:2
CAZy: GT9
PANDIT: PF01075
Blocks: IPB002201
Pfam Clan: CL0113.9

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR002201 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P37692 ADP-heptose--LPS heptosyltransferase 2

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR011910 Lipopolysaccharide heptosyltransferase II
IPR002201 Glycosyl transferase, family 9
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Campbell JA, Davies GJ, Bulone V, Henrissat B.
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities.
Biochem. J. 326 ( Pt 3) 929-39 1997 [PubMed: 9334165]
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=EBI&pubmedid=9334165
2. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
3. Kadrmas JL, Raetz CR.
Enzymatic synthesis of lipopolysaccharide in Escherichia coli. Purification and properties of heptosyltransferase i.
J. Biol. Chem. 273 2799-807 1998 [PubMed: 9446588]
http://dx.doi.org/10.1074/jbc.273.5.2799
4. Gronow S, Brabetz W, Brade H.
Comparative functional characterization in vitro of heptosyltransferase I (WaaC) and II (WaaF) from Escherichia coli.
Eur. J. Biochem. 267 6602-11 2000 [PubMed: 11054112]
http://dx.doi.org/10.1046/j.1432-1327.2000.01754.x

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InterPro 23.1