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InterPro: IPR002155 Thiolase
Protein matches
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UniProtKB Matches: 6724 proteins |
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Accession
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IPR002155 Thiolase |
Type
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Family |
Signatures
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InterPro Relationships
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Children
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IPR012793 Beta-ketoadipyl CoA thiolase
IPR012805 Acetyl-CoA C-acyltransferase FadA
IPR012806 Acetyl-CoA C-acyltransferase FadI
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Contains
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IPR016038 Thiolase-like, subgroup
IPR020610 Thiolase, active site
IPR020613 Thiolase, conserved site
IPR020615 Thiolase, acyl-enzyme intermediate active site
IPR020616 Thiolase, N-terminal
IPR020617 Thiolase, C-terminal
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GO Term annotation
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Process
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GO:0008152 metabolic process
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Function
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GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Two different types of thiolase [1, 2, 3] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (EC:2.3.1.9) and 3-ketoacyl-CoA thiolase (EC:2.3.1.16). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis.
In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes.
There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction [4].
Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [1].
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Structural links
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Database links
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Example proteins
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P09110 3-ketoacyl-CoA thiolase, peroxisomal
P27796 3-ketoacyl-CoA thiolase, peroxisomal
P34255 Uncharacterized protein B0303.3
Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal
Q8BWT1 3-ketoacyl-CoA thiolase, mitochondrial
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR016039 |
Thiolase-like |
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| IPR016038 |
Thiolase-like, subgroup |
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| IPR020610 |
Thiolase, active site |
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| IPR020613 |
Thiolase, conserved site |
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| IPR002155 |
Thiolase |
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| IPR020615 |
Thiolase, acyl-enzyme intermediate active site |
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| IPR020616 |
Thiolase, N-terminal |
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| IPR020617 |
Thiolase, C-terminal |
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PDB Chain |
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ModBase |
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CATH Domain |
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SWISS-MODEL |
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SCOP Domain |
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Publications
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1.
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Baker ME, Billheimer JT, Strauss JF 3rd.
Similarity between the amino-terminal portion of mammalian 58-kD sterol carrier protein (SCPx) and Escherichia coli acetyl-CoA acyltransferase: evidence for a gene fusion in SCPx.
DNA Cell Biol. 10 695-8 1991
[PubMed: 1755959]
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2.
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Yang SY, Yang XY, Healy-Louie G, Schulz H, Elzinga M.
Nucleotide sequence of the fadA gene. Primary structure of 3-ketoacyl-coenzyme A thiolase from Escherichia coli and the structural organization of the fadAB operon.
J. Biol. Chem. 265 10424-9 1990
[PubMed: 2191949]
http://intl.jbc.org/cgi/content/abstract/265/18/10424
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3.
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Igual JC, Gonzalez-Bosch C, Dopazo J, Perez-Ortin JE.
Phylogenetic analysis of the thiolase family. Implications for the evolutionary origin of peroxisomes.
J. Mol. Evol. 35 147-55 1992
[PubMed: 1354266]
http://dx.doi.org/10.1007/BF00183226
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4.
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Chevillard G, Clemencet MC, Latruffe N, Nicolas-Frances V.
Targeted disruption of the peroxisomal thiolase B gene in mouse: a new model to study disorders related to peroxisomal lipid metabolism.
Biochimie 86 849-56 2004
[PubMed: 15589695]
http://dx.doi.org/10.1016/j.biochi.2004.09.028
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Additional Reading
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Modis Y, Wierenga RK.
Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J. Mol. Biol. 297 2000 1171-82
[PubMed: 10764581]
http://dx.doi.org/10.1006/jmbi.2000.3638
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Tsuchiya D, Shimizu N, Ishikawa M, Suzuki Y, Morikawa K.
Ligand-induced domain rearrangement of fatty acid beta-oxidation multienzyme complex.
Structure 14 2006 237-46
[PubMed: 16472743]
http://dx.doi.org/10.1016/j.str.2005.10.011
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Ishikawa M, Tsuchiya D, Oyama T, Tsunaka Y, Morikawa K.
Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex.
EMBO J. 23 2004 2745-54
[PubMed: 15229654]
http://dx.doi.org/10.1038/sj.emboj.7600298
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Modis Y, Wierenga RK.
A biosynthetic thiolase in complex with a reaction intermediate: the crystal structure provides new insights into the catalytic mechanism.
Structure 7 1999 1279-90
[PubMed: 10545327]
http://dx.doi.org/10.1016/S0969-2126(00)80061-1
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Kursula P, Ojala J, Lambeir AM, Wierenga RK.
The catalytic cycle of biosynthetic thiolase: a conformational journey of an acetyl group through four binding modes and two oxyanion holes.
Biochemistry 41 2002 15543-56
[PubMed: 12501183]
http://dx.doi.org/10.1021/bi0266232
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InterPro 23.1
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