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InterPro: IPR002155 Thiolase

Protein matchesHelp
UniProtKB
Matches:
6724 proteins
AccessionHelp IPR002155 Thiolase
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Children IPR012793 Beta-ketoadipyl CoA thiolase
IPR012805 Acetyl-CoA C-acyltransferase FadA
IPR012806 Acetyl-CoA C-acyltransferase FadI
Contains IPR016038 Thiolase-like, subgroup
IPR020610 Thiolase, active site
IPR020613 Thiolase, conserved site
IPR020615 Thiolase, acyl-enzyme intermediate active site
IPR020616 Thiolase, N-terminal
IPR020617 Thiolase, C-terminal
GO Term annotationHelp
Process GO:0008152 metabolic process
Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Two different types of thiolase [1, 2, 3] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (EC:2.3.1.9) and 3-ketoacyl-CoA thiolase (EC:2.3.1.16). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis.

In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes.

There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction [4].

Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [1].

Structural linksHelp
SCOP: c.95.1.1
Database linksHelp
PDBe-motif: PS00098 , PS00099 , PS00737
Enzyme: EC:2.3.1
PROSITE doc: PDOC00092
PANDIT: PF00108 , PF02803
Blocks: IPB002155

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR002155 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P09110 3-ketoacyl-CoA thiolase, peroxisomal

P27796 3-ketoacyl-CoA thiolase, peroxisomal

P34255 Uncharacterized protein B0303.3

Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal

Q8BWT1 3-ketoacyl-CoA thiolase, mitochondrial

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR016039 Thiolase-like
IPR016038 Thiolase-like, subgroup
IPR020610 Thiolase, active site
IPR020613 Thiolase, conserved site
IPR002155 Thiolase
IPR020615 Thiolase, acyl-enzyme intermediate active site
IPR020616 Thiolase, N-terminal
IPR020617 Thiolase, C-terminal
PDB Chain
ModBase
CATH Domain
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Baker ME, Billheimer JT, Strauss JF 3rd.
Similarity between the amino-terminal portion of mammalian 58-kD sterol carrier protein (SCPx) and Escherichia coli acetyl-CoA acyltransferase: evidence for a gene fusion in SCPx.
DNA Cell Biol. 10 695-8 1991 [PubMed: 1755959]
2. Yang SY, Yang XY, Healy-Louie G, Schulz H, Elzinga M.
Nucleotide sequence of the fadA gene. Primary structure of 3-ketoacyl-coenzyme A thiolase from Escherichia coli and the structural organization of the fadAB operon.
J. Biol. Chem. 265 10424-9 1990 [PubMed: 2191949]
http://intl.jbc.org/cgi/content/abstract/265/18/10424
3. Igual JC, Gonzalez-Bosch C, Dopazo J, Perez-Ortin JE.
Phylogenetic analysis of the thiolase family. Implications for the evolutionary origin of peroxisomes.
J. Mol. Evol. 35 147-55 1992 [PubMed: 1354266]
http://dx.doi.org/10.1007/BF00183226
4. Chevillard G, Clemencet MC, Latruffe N, Nicolas-Frances V.
Targeted disruption of the peroxisomal thiolase B gene in mouse: a new model to study disorders related to peroxisomal lipid metabolism.
Biochimie 86 849-56 2004 [PubMed: 15589695]
http://dx.doi.org/10.1016/j.biochi.2004.09.028

Additional ReadingHelp
Modis Y, Wierenga RK.
Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J. Mol. Biol. 297 2000 1171-82 [PubMed: 10764581]
http://dx.doi.org/10.1006/jmbi.2000.3638
Tsuchiya D, Shimizu N, Ishikawa M, Suzuki Y, Morikawa K.
Ligand-induced domain rearrangement of fatty acid beta-oxidation multienzyme complex.
Structure 14 2006 237-46 [PubMed: 16472743]
http://dx.doi.org/10.1016/j.str.2005.10.011
Ishikawa M, Tsuchiya D, Oyama T, Tsunaka Y, Morikawa K.
Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex.
EMBO J. 23 2004 2745-54 [PubMed: 15229654]
http://dx.doi.org/10.1038/sj.emboj.7600298
Modis Y, Wierenga RK.
A biosynthetic thiolase in complex with a reaction intermediate: the crystal structure provides new insights into the catalytic mechanism.
Structure 7 1999 1279-90 [PubMed: 10545327]
http://dx.doi.org/10.1016/S0969-2126(00)80061-1
Kursula P, Ojala J, Lambeir AM, Wierenga RK.
The catalytic cycle of biosynthetic thiolase: a conformational journey of an acetyl group through four binding modes and two oxyanion holes.
Biochemistry 41 2002 15543-56 [PubMed: 12501183]
http://dx.doi.org/10.1021/bi0266232
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InterPro 23.1