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InterPro: IPR002133 S-adenosylmethionine synthetase

Protein matchesHelp
UniProtKB
Matches:
2342 proteins
AccessionHelp IPR002133 S-AdoMet_synthetase
TypeHelp Family
SignaturesHelp
GO Term annotationHelp
Process GO:0006730 one-carbon metabolic process
Function GO:0004478 methionine adenosyltransferase activity
GO:0005524 ATP binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

S-adenosylmethionine synthetase (MAT, EC:2.5.1.6) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP [1]. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis.

In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family.

The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance [2].

Structural linksHelp
SCOP: d.130.1.1
CATH: 3.30.300.10
Database linksHelp
PDBe-motif: PS00376 , PS00377
Enzyme: EC:2.5.1.6
PROSITE doc: PDOC00369
PANDIT: PF00438 , PF02772 , PF02773
Blocks: IPB002133

Taxonomic coverageHelp

Example proteinsHelp
O17680 Probable S-adenosylmethionine synthetase 1

P10659 S-adenosylmethionine synthetase 1

P31153 S-adenosylmethionine synthetase isoform type-2

P40320 S-adenosylmethionine synthetase

Q3THS6 S-adenosylmethionine synthetase isoform type-2

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR002133 S-adenosylmethionine synthetase
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Horikawa S, Sasuga J, Shimizu K, Ozasa H, Tsukada K.
Molecular cloning and nucleotide sequence of cDNA encoding the rat kidney S-adenosylmethionine synthetase.
J. Biol. Chem. 265 13683-6 1990 [PubMed: 1696256]
http://intl.jbc.org/cgi/reprint/265/23/13683.pdf
2. Sajkovski M, Simonce N, Dejanov I, Janicijevic D, Orglert G, Gligorieva B, Bojadziev L.
[Nature of vitamin K deficiency in the infant age]
21 299-302 1975 [PubMed: 1213535]

Additional ReadingHelp
Takusagawa F, Kamitori S, Markham GD.
Structure and function of S-adenosylmethionine synthetase: crystal structures of S-adenosylmethionine synthetase with ADP, BrADP, and PPi at 28 angstroms resolution.
Biochemistry 35 1996 2586-96 [PubMed: 8611562]
http://dx.doi.org/10.1021/bi952604z
Takusagawa F, Kamitori S, Misaki S, Markham GD.
Crystal structure of S-adenosylmethionine synthetase.
J. Biol. Chem. 271 1996 136-47 [PubMed: 8550549]
http://dx.doi.org/10.1074/jbc.271.1.136
Gonzalez B, Pajares MA, Hermoso JA, Guillerm D, Guillerm G, Sanz-Aparicio J.
Crystal structures of methionine adenosyltransferase complexed with substrates and products reveal the methionine-ATP recognition and give insights into the catalytic mechanism.
J. Mol. Biol. 331 2003 407-16 [PubMed: 12888348]
http://dx.doi.org/10.1016/S0022-2836(03)00728-9
Gonzalez B, Pajares MA, Hermoso JA, Alvarez L, Garrido F, Sufrin JR, Sanz-Aparicio J.
The crystal structure of tetrameric methionine adenosyltransferase from rat liver reveals the methionine-binding site.
J. Mol. Biol. 300 2000 363-75 [PubMed: 10873471]
http://dx.doi.org/10.1006/jmbi.2000.3858
Komoto J, Yamada T, Takata Y, Markham GD, Takusagawa F.
Crystal structure of the S-adenosylmethionine synthetase ternary complex: a novel catalytic mechanism of S-adenosylmethionine synthesis from ATP and Met.
Biochemistry 43 2004 1821-31 [PubMed: 14967023]
http://dx.doi.org/10.1021/bi035611t
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InterPro 23.1