spacer
spacer

Jump to: InterProScan Databases Documentation FTP site Help Advanced search

InterPro: IPR001944 Glycoside hydrolase, family 35

Protein matchesHelp
UniProtKB
Matches:
1030 proteins
AccessionHelp IPR001944 Glycoside_Hdrlase_35
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR008979 Galactose-binding domain-like
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR018954 Beta-galactosidase, domain 2
IPR019801 Glycoside hydrolase, family 35, conserved site
GO Term annotationHelp
Process GO:0005975 carbohydrate metabolic process
Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

O-Glycosyl hydrolases EC:3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [1, 2, 3]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [4]. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in clans.

Glycoside hydrolase family 35 GH35 comprises enzymes with only one known activity; beta-galactosidase (EC:3.2.1.23).

Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).

Structural linksHelp
Database linksHelp
PDBe-motif: PS01182
Enzyme: EC:3.2.1.23
CAZy: GH35
PROSITE doc: PDOC00910
PANDIT: PF01301
Blocks: IPB001944
Pfam Clan: CL0058.12

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR001944 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
A2RSQ1 Beta-galactosidase-1-like protein 3

A2X2H7 Beta-galactosidase 4

P16278 Beta-galactosidase

P48982 Beta-galactosidase

Q8GX69 Beta-galactosidase 16

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR001944 Glycoside hydrolase, family 35
IPR008979 Galactose-binding domain-like
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin
IPR017853 Glycoside hydrolase, catalytic core
IPR019801 Glycoside hydrolase, family 35, conserved site
SWISS-MODEL
ModBase

PublicationsHelp
1. Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G.
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.
Proc. Natl. Acad. Sci. U.S.A. 92 7090-4 1995 [PubMed: 7624375]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=7624375&action=stream&blobtype=pdf
2. Davies G, Henrissat B.
Structures and mechanisms of glycosyl hydrolases.
Structure 3 853-9 1995 [PubMed: 8535779]
http://dx.doi.org/10.1016/S0969-2126(01)00220-9
3. Bairoch A.
Classification of glycosyl hydrolase families and index of glycosyl hydrolase entries in SWISS-PROT.
1999
4. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999

Additional ReadingHelp
Taron CH, Benner JS, Hornstra LJ, Guthrie EP.
A novel beta-galactosidase gene isolated from the bacterium Xanthomonas manihotis exhibits strong homology to several eukaryotic beta-galactosidases.
Glycobiology 5 1995 603-10 [PubMed: 8563148]
http://dx.doi.org/10.1093/glycob/5.6.603
Rojas AL, Nagem RA, Neustroev KN, Arand M, Adamska M, Eneyskaya EV, Kulminskaya AA, Garratt RC, Golubev AM, Polikarpov I.
Crystal structures of beta-galactosidase from Penicillium sp. and its complex with galactose.
J. Mol. Biol. 343 2004 1281-92 [PubMed: 15491613]
http://dx.doi.org/10.1016/j.jmb.2004.09.012
spacer
spacer
InterPro 23.1