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InterPro: IPR001899 Surface protein from Gram-positive cocci

Protein matchesHelp
UniProtKB
Matches:
4561 proteins
AccessionHelp IPR001899 Surface_protein_Gram_pos_cocci
SecondaryHelp IPR006192
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR019931 LPXTG-motif cell wall anchor
Children IPR019948 Gram-positive anchor
Found in IPR011838 Pullulanase, extracellular
IPR012969 Fibrinogen binding
IPR014579 Predicted 5'-nucleotidase, SA0022 type
IPR019929 Haem uptake protein IsdB
GO Term annotationHelp
Component GO:0009986 cell surface
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Viruses, parasites and bacteria are covered in protein and sugar molecules that help them gain entry into a host by counteracting the host's defences. One such molecule is the M protein produced by certain streptococcal bacteria. M proteins embody a motif that is now known to be shared by many Gram-positive bacterial surface proteins. The motif includes a conserved hexapeptide, which precedes a hydrophobic C-terminal membrane anchor, which itself precedes a cluster of basic residues [1, 2]. This structure is represented in the following schematic representation:

  +--------------------------------------------+-+--------+-+
  |    Variable length extracellular domain    |H| Anchor |B|
  +--------------------------------------------+-+--------+-+

  'H': conserved hexapeptide.
  'B': cluster of basic residues.

It has been proposed that this hexapeptide sequence is responsible for a post- translational modification necessary for the proper anchoring of the proteins which bear it, to the cell wall.

Database linksHelp
PROSITE doc: PDOC00373
PANDIT: PF00746
Blocks: IPB001899

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR001899 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P02976 Immunoglobulin G-binding protein A

Q4TU93 C-type mannose receptor 2

Q5R3F8 Leucine-rich repeat and fibronectin type-III domain-containing protein 6

Q68FM6 Leucine-rich repeat and fibronectin type-III domain-containing protein 6

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR000772 Ricin B lectin
IPR019931 LPXTG-motif cell wall anchor
IPR000562 Type II fibronectin, collagen-binding
IPR013806 Kringle-like fold
IPR000483 Cysteine-rich flanking region, C-terminal domain
IPR002353 Type II antifreeze protein
IPR001304 C-type lectin
IPR018378 C-type lectin, conserved site
IPR002482 Peptidoglycan-binding Lysin subgroup
IPR001611 Leucine-rich repeat
IPR018392 Peptidoglycan-binding lysin domain
IPR003132 Protein A, Ig-binding
IPR001899 Surface protein from Gram-positive cocci
IPR003961 Fibronectin, type III
IPR008997 Ricin B-related lectin
IPR009063 Immunoglobulin/albumin-binding
IPR005038 Octapeptide repeat
IPR016187 C-type lectin fold
IPR016186 C-type lectin-like
IPR005877 YSIRK Gram-positive signal peptide
IPR019948 Gram-positive anchor
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Schneewind O, Jones KF, Fischetti VA.
Sequence and structural characteristics of the trypsin-resistant T6 surface protein of group A streptococci.
J. Bacteriol. 172 3310-7 1990 [PubMed: 2188957]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=2188957&action=stream&blobtype=pdf
2. Fischetti VA, Pancholi V, Schneewind O.
Conservation of a hexapeptide sequence in the anchor region of surface proteins from gram-positive cocci.
Mol. Microbiol. 4 1603-5 1990 [PubMed: 2287281]
http://dx.doi.org/10.1111/j.1365-2958.1990.tb02072.x

Additional ReadingHelp
Mazmanian SK, Liu G, Ton-That H, Schneewind O.
Staphylococcus aureus sortase, an enzyme that anchors surface proteins to the cell wall.
Science 285 1999 760-3 [PubMed: 10427003]
http://dx.doi.org/10.1126/science.285.5428.760
Perry AM, Ton-That H, Mazmanian SK, Schneewind O.
Anchoring of surface proteins to the cell wall of Staphylococcus aureus. III. Lipid II is an in vivo peptidoglycan substrate for sortase-catalyzed surface protein anchoring.
J. Biol. Chem. 277 2002 16241-8 [PubMed: 11856734]
http://dx.doi.org/10.1074/jbc.M109194200
Poulsen K, Reinholdt J, Jespersgaard C, Boye K, Brown TA, Hauge M, Kilian M.
A comprehensive genetic study of streptococcal immunoglobulin A1 proteases: evidence for recombination within and between species.
Infect. Immun. 66 1998 181-90 [PubMed: 9423856]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=9423856&action=stream&blobtype=pdf
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InterPro 23.1