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InterPro: IPR001791 Laminin G
Protein matches
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UniProtKB Matches: 1324 proteins |
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Accession
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IPR001791 Laminin_G |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR013320 Concanavalin A-like lectin/glucanase, subgroup
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Children
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IPR012679 Laminin G, subdomain 1
IPR012680 Laminin G, subdomain 2
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Laminins are large heterotrimeric glycoproteins involved in basement membrane function [1]. The laminin globular (G) domain can be found in one to several copies in various laminin family members, including a large number of extracellular proteins. The C terminus of the laminin alpha chain contains a tandem repeat of five laminin G domains, which are critical for heparin-binding and cell attachment activity [2]. Laminin alpha4 is distributed in a variety of tissues including peripheral nerves, dorsal root ganglion, skeletal muscle and capillaries; in the neuromuscular junction, it is required for synaptic specialisation [3]. The structure of the laminin-G domain has been predicted to resemble that of pentraxin [4].
Laminin G domains can vary in their function, and a variety of binding functions have been ascribed to different LamG modules. For example, the laminin alpha1 and alpha2 chains each have five C-teminal laminin G domains, where only domains LG4 and LG5 contain binding sites for heparin, sulphatides and the cell surface receptor dystroglycan [2]. Laminin G-containing proteins appear to have a wide variety of roles in cell adhesion, signalling, migration, assembly and differentiation. Proteins with laminin-G domains include:
- Laminin.
- Merosin.
- Agrin.
- Neurexins.
- Vitamin K dependent protein S.
- Sex steroid binding protein SBP/SHBG.
- Drosophila proteins Slit, Crumbs, Fat.
- several proteoglycan precursors.
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Structural links
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Database links
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Example proteins
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O35206 Collagen alpha-1(XV) chain
O94813 Slit homolog 2 protein
P24014 Protein slit
P34616 Cadherin-3
P62575 Sialidase A
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR010515 |
Collagenase NC10/endostatin |
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| IPR001791 |
Laminin G |
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| IPR002860 |
BNR repeat |
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| IPR019931 |
LPXTG-motif cell wall anchor |
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| IPR006210 |
EGF-like |
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| IPR000483 |
Cysteine-rich flanking region, C-terminal domain |
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| IPR004124 |
Glycoside hydrolase, family 33, N-terminal |
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| IPR001611 |
Leucine-rich repeat |
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| IPR013032 |
EGF-like region, conserved site |
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| IPR001899 |
Surface protein from Gram-positive cocci |
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| IPR008160 |
Collagen triple helix repeat |
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| IPR012680 |
Laminin G, subdomain 2 |
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| IPR018097 |
EGF-like calcium-binding, conserved site |
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| IPR006207 |
Cystine knot, C-terminal |
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| IPR001881 |
EGF-like calcium-binding |
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| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
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| IPR020894 |
Cadherin conserved site |
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| IPR012679 |
Laminin G, subdomain 1 |
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| IPR003591 |
Leucine-rich repeat, typical subtype |
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| IPR016187 |
C-type lectin fold |
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| IPR016186 |
C-type lectin-like |
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| IPR015919 |
Cadherin-like |
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| IPR002126 |
Cadherin |
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| IPR000372 |
Leucine-rich repeat-containing N-terminal domain |
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| IPR000152 |
EGF-type aspartate/asparagine hydroxylation site |
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| IPR000742 |
EGF-like, type 3 |
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| IPR011040 |
Neuraminidase |
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| IPR005877 |
YSIRK Gram-positive signal peptide |
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| IPR003645 |
Follistatin-like, N-terminal |
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| IPR008985 |
Concanavalin A-like lectin/glucanase |
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| IPR003129 |
Laminin G, thrombospondin-type, N-terminal |
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| IPR006209 |
EGF |
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ModBase |
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SWISS-MODEL |
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PDB Chain |
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CATH Domain |
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SCOP Domain |
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Publications
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1.
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Sasaki T, Fassler R, Hohenester E.
Laminin: the crux of basement membrane assembly.
J. Cell Biol. 164 959-63 2004
[PubMed: 15037599]
http://dx.doi.org/10.1083/jcb.200401058
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2.
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Tisi D, Talts JF, Timpl R, Hohenester E.
Structure of the C-terminal laminin G-like domain pair of the laminin alpha2 chain harbouring binding sites for alpha-dystroglycan and heparin.
EMBO J. 19 1432-40 2000
[PubMed: 10747011]
http://dx.doi.org/10.1093/emboj/19.7.1432
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3.
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Ichikawa N, Kasai S, Suzuki N, Nishi N, Oishi S, Fujii N, Kadoya Y, Hatori K, Mizuno Y, Nomizu M, Arikawa-Hirasawa E.
Identification of neurite outgrowth active sites on the laminin alpha4 chain G domain.
Biochemistry 44 5755-62 2005
[PubMed: 15823034]
http://dx.doi.org/10.1021/bi0476228
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4.
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Beckmann G, Hanke J, Bork P, Reich JG.
Merging extracellular domains: fold prediction for laminin G-like and amino-terminal thrombospondin-like modules based on homology to pentraxins.
J. Mol. Biol. 275 725-30 1998
[PubMed: 9480764]
http://dx.doi.org/10.1006/jmbi.1997.1510
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Additional Reading
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Koehnke J, Jin X, Trbovic N, Katsamba PS, Brasch J, Ahlsen G, Scheiffele P, Honig B, Palmer AG 3rd, Shapiro L.
Crystal structures of beta-neurexin 1 and beta-neurexin 2 ectodomains and dynamics of splice insertion sequence 4.
Structure 16 2008 410-21
[PubMed: 18334216]
http://dx.doi.org/10.1016/j.str.2007.12.024
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Yurchenco PD, Sung U, Ward MD, Yamada Y, O'Rear JJ.
Recombinant laminin G domain mediates myoblast adhesion and heparin binding.
J. Biol. Chem. 268 1993 8356-65
[PubMed: 8463343]
http://intl.jbc.org/cgi/reprint/268/11/8356.pdf
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Rudenko G, Nguyen T, Chelliah Y, Sudhof TC, Deisenhofer J.
The structure of the ligand-binding domain of neurexin Ibeta: regulation of LNS domain function by alternative splicing.
Cell 99 1999 93-101
[PubMed: 10520997]
http://dx.doi.org/10.1016/S0092-8674(00)80065-3
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Harrison D, Hussain SA, Combs AC, Ervasti JM, Yurchenco PD, Hohenester E.
Crystal structure and cell surface anchorage sites of laminin alpha1LG4-5.
J. Biol. Chem. 282 2007 11573-81
[PubMed: 17307732]
http://dx.doi.org/10.1074/jbc.M610657200
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Chen X, Liu H, Shim AH, Focia PJ, He X.
Structural basis for synaptic adhesion mediated by neuroligin-neurexin interactions.
Nat. Struct. Mol. Biol. 15 2008 50-6
[PubMed: 18084303]
http://dx.doi.org/10.1038/nsmb1350
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Arac D, Boucard AA, Ozkan E, Strop P, Newell E, Sudhof TC, Brunger AT.
Structures of neuroligin-1 and the neuroligin-1/neurexin-1 beta complex reveal specific protein-protein and protein-Ca2+ interactions.
Neuron 56 2007 992-1003
[PubMed: 18093522]
http://dx.doi.org/10.1016/j.neuron.2007.12.002
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Talts JF, Andac Z, Gohring W, Brancaccio A, Timpl R.
Binding of the G domains of laminin alpha1 and alpha2 chains and perlecan to heparin, sulfatides, alpha-dystroglycan and several extracellular matrix proteins.
EMBO J. 18 1999 863-70
[PubMed: 10022829]
http://dx.doi.org/10.1093/emboj/18.4.863
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Shen KC, Kuczynska DA, Wu IJ, Murray BH, Sheckler LR, Rudenko G.
Regulation of neurexin 1beta tertiary structure and ligand binding through alternative splicing.
Structure 16 2008 422-31
[PubMed: 18334217]
http://dx.doi.org/10.1016/j.str.2008.01.005
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Vuolteenaho R, Chow LT, Tryggvason K.
Structure of the human laminin B1 chain gene.
J. Biol. Chem. 265 1990 15611-6
[PubMed: 1975589]
http://intl.jbc.org/cgi/content/abstract/265/26/15611
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Sung U, O'Rear JJ, Yurchenco PD.
Localization of heparin binding activity in recombinant laminin G domain.
Eur. J. Biochem. 250 1997 138-43
[PubMed: 9432001]
http://dx.doi.org/10.1111/j.1432-1033.1997.00138.x
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