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InterPro: IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal
Protein matches
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UniProtKB Matches: 3023 proteins |
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Accession
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IPR001732 UDP-Glc/GDP-Man_DH_N |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR016040 NAD(P)-binding domain
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Found in
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IPR017476 Nucleotide sugar dehydrogenase
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GO Term annotation
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Process
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GO:0055114 oxidation reduction
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Function
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GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 NAD or NADH binding
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InterPro annotation
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Entry Details in BioMart
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Abstract
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The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [1, 2].
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, EC:1.1.1.22, is an important enzyme in the synthesis of hemicellulose and pectin [3], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation [4]. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence [5].
GDP-mannose dehydrogenase, EC:1.1.1.132, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [6], while in A. vinelandii it is essential for the encystment process [7].
This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [8, 9].
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Structural links
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Database links
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Pfam Clan: CL0063.21
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Publications
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1.
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Roychoudhury S, May TB, Gill JF, Singh SK, Feingold DS, Chakrabarty AM.
Purification and characterization of guanosine diphospho-D-mannose dehydrogenase. A key enzyme in the biosynthesis of alginate by Pseudomonas aeruginosa.
J. Biol. Chem. 264 9380-5 1989
[PubMed: 2470755]
http://intl.jbc.org/cgi/content/abstract/264/16/9380
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2.
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Campbell RE, Sala RF, van de Rijn I, Tanner ME.
Properties and kinetic analysis of UDP-glucose dehydrogenase from group A streptococci. Irreversible inhibition by UDP-chloroacetol.
J. Biol. Chem. 272 3416-22 1997
[PubMed: 9013585]
http://dx.doi.org/10.1074/jbc.272.6.3416
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3.
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Johansson H, Sterky F, Amini B, Lundeberg J, Kleczkowski LA.
Molecular cloning and characterization of a cDNA encoding poplar UDP-glucose dehydrogenase, a key gene of hemicellulose/pectin formation.
Biochim. Biophys. Acta 1576 53-8 2002
[PubMed: 12031484]
http://dx.doi.org/10.1016/S0167-4781(02)00292-0
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4.
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Walsh EC, Stainier DY.
UDP-glucose dehydrogenase required for cardiac valve formation in zebrafish.
Science 293 1670-3 2001
[PubMed: 11533493]
http://dx.doi.org/10.1126/science.293.5535.1670
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5.
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Chang KW, Weng SF, Tseng YH.
UDP-glucose dehydrogenase gene of Xanthomonas campestris is required for virulence.
Biochem. Biophys. Res. Commun. 287 550-5 2001
[PubMed: 11554764]
http://dx.doi.org/10.1006/bbrc.2001.5591
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6.
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Naught LE, Gilbert S, Imhoff R, Snook C, Beamer L, Tipton P.
Allosterism and cooperativity in Pseudomonas aeruginosa GDP-mannose dehydrogenase.
Biochemistry 41 9637-45 2002
[PubMed: 12135385]
http://dx.doi.org/10.1021/bi025862m
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7.
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Nunez C, Moreno S, Soberon-Chavez G, Espin G.
The Azotobacter vinelandii response regulator AlgR is essential for cyst formation.
J. Bacteriol. 181 141-8 1999
[PubMed: 9864323]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=9864323&action=stream&blobtype=pdf
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8.
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Campbell RE, Mosimann SC, van De Rijn I, Tanner ME, Strynadka NC.
The first structure of UDP-glucose dehydrogenase reveals the catalytic residues necessary for the two-fold oxidation.
Biochemistry 39 7012-23 2000
[PubMed: 10841783]
http://dx.doi.org/10.1021/bi000181h
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9.
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Snook CF, Tipton PA, Beamer LJ.
Crystal structure of GDP-mannose dehydrogenase: a key enzyme of alginate biosynthesis in P. aeruginosa.
Biochemistry 42 4658-68 2003
[PubMed: 12705829]
http://dx.doi.org/10.1021/bi027328k
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InterPro 23.1
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