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InterPro: IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase
Protein matches
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UniProtKB Matches: 4059 proteins |
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Accession
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IPR001709 Flavoprot_Pyr_Nucl_cyt_Rdtase |
Type
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Domain |
Signatures
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InterPro Relationships
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Children
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IPR001433 Oxidoreductase FAD/NAD(P)-binding
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Found in
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IPR001221 Phenol hydroxylase reductase
IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain
IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit
IPR012146 Ferredoxin--NADP reductase
IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein
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Contains
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IPR003097 FAD-binding, type 1
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GO Term annotation
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Process
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GO:0055114 oxidation reduction
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Function
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GO:0016491 oxidoreductase activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Flavoprotein pyridine nucleotide cytochrome reductases [1] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [2], plant and fungal NAD(P)H:nitrate reductases [1, 3], NADH:cytochrome b5 reductases [4], NADPH:P450 reductases [5], NADPH:sulphite reductases [6], nitric oxide synthases [7], phthalate dioxygenase reductase [8], and various other flavoproteins.
Despite functional similarities, FPNCRs show no sequence similarity to NADPH:adrenodoxin reductases [9], nor to
bacterial ferredoxin:NAD+reductases and their homologues [10]. To date, 3D-structures of 4 members of the family have been solved: Spinacia oleracea (Spinach) ferredoxin:NADP+ reductase [11]; Burkholderia cepacia (Pseudomonas cepacia)
phthalate dioxygenase reductase [8]; the flavoprotein domain of Zea mays (Maize) nitrate reductase [12]; and Sus scrofa (Pig) NADH:cytochrome b5 reductase [13]. In all of them, the FAD-binding domain (N-terminal) has the topology of an anti-parallel beta-barrel, while the NAD(P)-binding domain (C-terminal) has the topology of a classical pyridine dinucleotide-binding fold (i.e. a central parallel beta-sheet with 2 helices on each side) [8]. In spite of such structural similarities, the level of amino acid identity between family members is at or below the limit of significance (e.g., nitrate reductase is only 15% identical to FNR) [12].
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Structural links
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Database links
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Publications
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1.
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Hyde GE, Crawford NM, Campbell WH.
The sequence of squash NADH:nitrate reductase and its relationship to the sequences of other flavoprotein oxidoreductases. A family of flavoprotein pyridine nucleotide cytochrome reductases.
J. Biol. Chem. 266 23542-7 1991
[PubMed: 1748631]
http://intl.jbc.org/cgi/reprint/266/35/23542.pdf
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2.
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Karplus PA, Bruns CM.
Structure-function relations for ferredoxin reductase.
J. Bioenerg. Biomembr. 26 89-99 1994
[PubMed: 8027025]
http://dx.doi.org/10.1007/BF00763221
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3.
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Campbell WH, Kinghorn KR.
Functional domains of assimilatory nitrate reductases and nitrite reductases.
Trends Biochem. Sci. 15 315-9 1990
[PubMed: 2204158]
http://dx.doi.org/10.1016/0968-0004(90)90021-3
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4.
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Yubisui T, Miyata T, Iwanaga S, Tamura M, Takeshita M.
Complete amino acid sequence of NADH-cytochrome b5 reductase purified from human erythrocytes.
J. Biochem. 99 407-22 1986
[PubMed: 3700359]
http://jb.oxfordjournals.org/cgi/content/abstract/99/2/407
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5.
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Porter TD.
An unusual yet strongly conserved flavoprotein reductase in bacteria and mammals.
Trends Biochem. Sci. 16 154-8 1991
[PubMed: 1908607]
http://dx.doi.org/10.1016/0968-0004(91)90059-5
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6.
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Ostrowski J, Barber MJ, Rueger DC, Miller BE, Siegel LM, Kredich NM.
Characterization of the flavoprotein moieties of NADPH-sulfite reductase from Salmonella typhimurium and Escherichia coli. Physicochemical and catalytic properties, amino acid sequence deduced from DNA sequence of cysJ, and comparison with NADPH-cytochrome P-450 reductase.
J. Biol. Chem. 264 15796-808 1989
[PubMed: 2550423]
http://intl.jbc.org/cgi/content/abstract/264/27/15796
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7.
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Bredt DS, Hwang PM, Glatt CE, Lowenstein C, Reed RR, Snyder SH.
Cloned and expressed nitric oxide synthase structurally resembles cytochrome P-450 reductase.
Nature 351 714-8 1991
[PubMed: 1712077]
http://dx.doi.org/10.1038/351714a0
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8.
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Correll CC, Ludwig ML, Bruns CM, Karplus PA.
Structural prototypes for an extended family of flavoprotein reductases: comparison of phthalate dioxygenase reductase with ferredoxin reductase and ferredoxin.
Protein Sci. 2 2112-33 1993
[PubMed: 8298460]
http://www.proteinscience.org/cgi/content/abstract/2/12/2112
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9.
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Hanukoglu I, Gutfinger T.
cDNA sequence of adrenodoxin reductase. Identification of NADP-binding sites in oxidoreductases.
Eur. J. Biochem. 180 479-84 1989
[PubMed: 2924777]
http://dx.doi.org/10.1111/j.1432-1033.1989.tb14671.x
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10.
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Eggink G, Engel H, Vriend G, Terpstra P, Witholt B.
Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints.
J. Mol. Biol. 212 135-42 1990
[PubMed: 2319593]
http://dx.doi.org/10.1016/0022-2836(90)90310-I
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11.
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Karplus PA, Daniels MJ, Herriott JR.
Atomic structure of ferredoxin-NADP+ reductase: prototype for a structurally novel flavoenzyme family.
Science 251 60-6 1991
[PubMed: 1986412]
http://www.sciencemag.org/cgi/content/abstract/251/4989/60
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12.
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Lu G, Campbell WH, Schneider G, Lindqvist Y.
Crystal structure of the FAD-containing fragment of corn nitrate reductase at 2.5 A resolution: relationship to other flavoprotein reductases.
Structure 2 809-21 1994
[PubMed: 7812715]
http://dx.doi.org/10.1016/S0969-2126(94)00082-4
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13.
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Nishida H, Inaka K, Miki K.
Specific arrangement of three amino acid residues for flavin-binding barrel structures in NADH-cytochrome b5 reductase and the other flavin-dependent reductases.
FEBS Lett. 361 97-100 1995
[PubMed: 7890048]
http://dx.doi.org/10.1016/0014-5793(95)00161-2
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Additional Reading
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Tejero J, Perez-Dorado I, Maya C, Martinez-Julvez M, Sanz-Aparicio J, Gomez-Moreno C, Hermoso JA, Medina M.
C-terminal tyrosine of ferredoxin-NADP+ reductase in hydride transfer processes with NAD(P)+/H.
Biochemistry 44 2005 13477-90
[PubMed: 16216071]
http://dx.doi.org/10.1021/bi051278c
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Mayoral T, Martinez-Julvez M, Perez-Dorado I, Sanz-Aparicio J, Gomez-Moreno C, Medina M, Hermoso JA.
Structural analysis of interactions for complex formation between Ferredoxin-NADP+ reductase and its protein partners.
Proteins 59 2005 592-602
[PubMed: 15789405]
http://dx.doi.org/10.1002/prot.20450
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Nascimento AS, Catalano-Dupuy DL, Bernardes A, Neto Mde O, Santos MA, Ceccarelli EA, Polikarpov I.
Crystal structures of Leptospira interrogans FAD-containing ferredoxin-NADP+ reductase and its complex with NADP+.
BMC Struct. Biol. 7 2007 69
[PubMed: 17958910]
http://dx.doi.org/10.1186/1472-6807-7-69
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Wang A, Zeng Y, Han H, Weeratunga S, Morgan BN, Moenne-Loccoz P, Schonbrunn E, Rivera M.
Biochemical and structural characterization of Pseudomonas aeruginosa Bfd and FPR: ferredoxin NADP+ reductase and not ferredoxin is the redox partner of heme oxygenase under iron-starvation conditions.
Biochemistry 46 2007 12198-211
[PubMed: 17915950]
http://dx.doi.org/10.1021/bi7013135
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Cremades N, Bueno M, Toja M, Sancho J.
Towards a new therapeutic target: Helicobacter pylori flavodoxin.
Biophys. Chem. 115 2005 267-76
[PubMed: 15752617]
http://dx.doi.org/10.1016/j.bpc.2004.12.045
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