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InterPro: IPR001286 Glycoside hydrolase, family 59

Protein matchesHelp
UniProtKB
Matches:
47 proteins
AccessionHelp IPR001286 Glyco_hydro_59
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR013781 Glycoside hydrolase, subgroup, catalytic core
GO Term annotationHelp
Process GO:0006683 galactosylceramide catabolic process
Function GO:0004336 galactosylceramidase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

O-Glycosyl hydrolases EC:3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [1, 2, 3]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [4]. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in clans.

Glycoside hydrolase family 59 GH59 comprises enzymes with only one known activity; galactocerebrosidase (EC:3.2.1.46).

Globoid cell leukodystrophy (Krabbe disease) is a severe, autosomal recessive disorder that results from deficiency of galactocerebrosidase (GALC) activity [5, 6, 7]. GALC is responsible for the lysosomal catabolism of certain galactolipids, including galactosylceramide and psychosine [5].

Database linksHelp
Enzyme: EC:3.2.1.46
CAZy: GH59
PANDIT: PF02057
Blocks: IPB001286
Pfam Clan: CL0058.12

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR001286 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
B5X3C1 Galactocerebrosidase

P54803 Galactocerebrosidase

P54818 Galactocerebrosidase

Q95QT2 Putative galactocerebrosidase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR017853 Glycoside hydrolase, catalytic core
IPR001286 Glycoside hydrolase, family 59
SWISS-MODEL
ModBase

PublicationsHelp
1. Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G.
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.
Proc. Natl. Acad. Sci. U.S.A. 92 7090-4 1995 [PubMed: 7624375]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=7624375&action=stream&blobtype=pdf
2. Davies G, Henrissat B.
Structures and mechanisms of glycosyl hydrolases.
Structure 3 853-9 1995 [PubMed: 8535779]
http://dx.doi.org/10.1016/S0969-2126(01)00220-9
3. Bairoch A.
Classification of glycosyl hydrolase families and index of glycosyl hydrolase entries in SWISS-PROT.
1999
4. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
5. Victoria T, Rafi MA, Wenger DA.
Cloning of the canine GALC cDNA and identification of the mutation causing globoid cell leukodystrophy in West Highland White and Cairn terriers.
Genomics 33 457-62 1996 [PubMed: 8661004]
http://dx.doi.org/10.1006/geno.1996.0220
6. Luzi P, Rafi MA, Wenger DA.
Structure and organization of the human galactocerebrosidase (GALC) gene.
Genomics 26 407-9 1995 [PubMed: 7601472]
http://dx.doi.org/10.1016/0888-7543(95)80230-J
7. Sakai N, Fukushima H, Inui K, Fu L, Nishigaki T, Yanagihara I, Tatsumi N, Ozono K, Okada S.
Human galactocerebrosidase gene: promoter analysis of the 5'-flanking region and structural organization.
Biochim. Biophys. Acta 1395 62-7 1998 [PubMed: 9434153]
http://dx.doi.org/10.1016/S0167-4781(97)00140-1

Additional ReadingHelp
el Hassouni M, Henrissat B, Chippaux M, Barras F.
Nucleotide sequences of the arb genes, which control beta-glucoside utilization in Erwinia chrysanthemi: comparison with the Escherichia coli bgl operon and evidence for a new beta-glycohydrolase family including enzymes from eubacteria, archeabacteria, and humans.
J. Bacteriol. 174 1992 765-77 [PubMed: 1732212]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=1732212&action=stream&blobtype=pdf
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InterPro 23.1