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InterPro: IPR001139 Glycoside hydrolase, family 30

Protein matchesHelp
UniProtKB
Matches:
425 proteins
AccessionHelp IPR001139 Glyco_hydro_30
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Contains IPR013781 Glycoside hydrolase, subgroup, catalytic core
GO Term annotationHelp
Process GO:0006665 sphingolipid metabolic process
GO:0007040 lysosome organization
Function GO:0004348 glucosylceramidase activity
Component GO:0005764 lysosome
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

O-Glycosyl hydrolases EC:3.2.1. are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [1, 2, 3]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site [4]. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in clans.

Glycoside hydrolase family 30 GH30 comprises enzymes with only one known activity; glucosylceramidase (EC:3.2.1.45).

Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides [5]. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [5, 6].

Structural linksHelp
SCOP: b.71.1.2 , c.1.8.3
Database linksHelp
Enzyme: EC:3.2.1
CAZy: GH30
PANDIT: PF02055
Blocks: IPB001139
Pfam Clan: CL0058.12

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR001139 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P04062 Glucosylceramidase

P17439 Glucosylceramidase

Q45070 Glucuronoxylanase xynC

Q7M4T0 Endo-1,6-beta-D-glucanase

Q9BDT0 Glucosylceramidase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR001139 Glycoside hydrolase, family 30
IPR017853 Glycoside hydrolase, catalytic core
SWISS-MODEL
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Henrissat B, Callebaut I, Fabrega S, Lehn P, Mornon JP, Davies G.
Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases.
Proc. Natl. Acad. Sci. U.S.A. 92 7090-4 1995 [PubMed: 7624375]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=7624375&action=stream&blobtype=pdf
2. Davies G, Henrissat B.
Structures and mechanisms of glycosyl hydrolases.
Structure 3 853-9 1995 [PubMed: 8535779]
http://dx.doi.org/10.1016/S0969-2126(01)00220-9
3. Bairoch A.
Classification of glycosyl hydrolase families and index of glycosyl hydrolase entries in SWISS-PROT.
1999
4. Henrissat B, Coutinho PM.
Carbohydrate-Active Enzymes server.
1999
5. Dinur T, Osiecki KM, Legler G, Gatt S, Desnick RJ, Grabowski GA.
Human acid beta-glucosidase: isolation and amino acid sequence of a peptide containing the catalytic site.
Proc. Natl. Acad. Sci. U.S.A. 83 1660-4 1986 [PubMed: 3456607]
http://ukpmc.ac.uk/articlerender.cgi?tool=EBI&pubmedid=3456607
6. Iwasawa K, Ida H, Eto Y.
Differences in origin of the 1448C mutation in patients with Gaucher disease.
39 451-3 1997 [PubMed: 9316290]

Additional ReadingHelp
Lieberman RL, Wustman BA, Huertas P, Powe AC Jr, Pine CW, Khanna R, Schlossmacher MG, Ringe D, Petsko GA.
Structure of acid beta-glucosidase with pharmacological chaperone provides insight into Gaucher disease.
Nat. Chem. Biol. 3 2007 101-7 [PubMed: 17187079]
http://dx.doi.org/10.1038/nchembio850
Shaaltiel Y, Bartfeld D, Hashmueli S, Baum G, Brill-Almon E, Galili G, Dym O, Boldin-Adamsky SA, Silman I, Sussman JL, Futerman AH, Aviezer D.
Production of glucocerebrosidase with terminal mannose glycans for enzyme replacement therapy of Gaucher's disease using a plant cell system.
Plant Biotechnol. J. 5 2007 579-90 [PubMed: 17524049]
http://dx.doi.org/10.1111/j.1467-7652.2007.00263.x
Brumshtein B, Wormald MR, Silman I, Futerman AH, Sussman JL.
Structural comparison of differently glycosylated forms of acid-beta-glucosidase, the defective enzyme in Gaucher disease.
Acta Crystallogr. D Biol. Crystallogr. 62 2006 1458-65 [PubMed: 17139081]
http://dx.doi.org/10.1107/S0907444906038303
Beutler E.
Gaucher disease phenotypes outflanked?
Genome Res. 7 1997 950-1 [PubMed: 9331364]
http://www.genome.org/cgi/content/abstract/7/10/950
Liou B, Kazimierczuk A, Zhang M, Scott CR, Hegde RS, Grabowski GA.
Analyses of variant acid beta-glucosidases: effects of Gaucher disease mutations.
J. Biol. Chem. 281 2006 4242-53 [PubMed: 16293621]
http://dx.doi.org/10.1074/jbc.M511110200
Brumshtein B, Greenblatt HM, Butters TD, Shaaltiel Y, Aviezer D, Silman I, Futerman AH, Sussman JL.
Crystal structures of complexes of N-butyl- and N-nonyl-deoxynojirimycin bound to acid beta-glucosidase: insights into the mechanism of chemical chaperone action in Gaucher disease.
J. Biol. Chem. 282 2007 29052-8 [PubMed: 17666401]
http://dx.doi.org/10.1074/jbc.M705005200
Winfield SL, Tayebi N, Martin BM, Ginns EI, Sidransky E.
Identification of three additional genes contiguous to the glucocerebrosidase locus on chromosome 1q21: implications for Gaucher disease.
Genome Res. 7 1997 1020-6 [PubMed: 9331372]
http://www.genome.org/cgi/content/abstract/7/10/1020
el Hassouni M, Henrissat B, Chippaux M, Barras F.
Nucleotide sequences of the arb genes, which control beta-glucoside utilization in Erwinia chrysanthemi: comparison with the Escherichia coli bgl operon and evidence for a new beta-glycohydrolase family including enzymes from eubacteria, archeabacteria, and humans.
J. Bacteriol. 174 1992 765-77 [PubMed: 1732212]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=1732212&action=stream&blobtype=pdf
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InterPro 23.1