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InterPro: IPR001048 Aspartate/glutamate/uridylate kinase

Protein matchesHelp
UniProtKB
Matches:
10072 proteins
AccessionHelp IPR001048 Asp/Glu/Uridylate_kinase
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Children IPR001057 Glutamate 5-kinase
IPR004662 Acetylglutamate kinase
Found in IPR001341 Aspartate kinase domain
IPR003964 Bacterial carbamate kinase
IPR005260 Aspartate kinase, monofunctional class
IPR005766 Delta l-pyrroline-5-carboxylate synthetase
IPR010167 Amino-acid N-acetyltransferase (ArgA)
IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I
IPR011243 N-acetylglutamate synthase, animal
IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase
IPR011375 Amino acid kinase predicted
IPR011817 Uridylate kinase
IPR011818 Uridylate kinase, archaeal/spirochete, putative
IPR011819 Pyrococcus aspartate kinase subunit, putative
IPR015963 Uridylate kinase, bacteria
Contains IPR018042 Aspartate kinase, conserved site
IPR019797 Glutamate 5-kinase, conserved site
GO Term annotationHelp
Process GO:0008652 cellular amino acid biosynthetic process
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively [1]. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits [2].

In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied [3]. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.

Structural linksHelp
CATH: 3.40.1160.10
Database linksHelp
Enzyme: EC:2.7
PANDIT: PF00696

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR001048 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P10869 Aspartokinase

P54886 Delta-1-pyrroline-5-carboxylate synthetase

P54889 Probable delta-1-pyrroline-5-carboxylate synthetase

Q8R4H7 N-acetylglutamate synthase, mitochondrial

Q9LYU8 Aspartokinase 1, chloroplastic

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR001341 Aspartate kinase domain
IPR005715 Glutamate 5-kinase, ProB-related
IPR002912 Amino acid-binding ACT
IPR018042 Aspartate kinase, conserved site
IPR000965 Gamma-glutamyl phosphate reductase GPR
IPR016163 Aldehyde dehydrogenase, C-terminal
IPR016162 Aldehyde dehydrogenase, N-terminal
IPR016161 Aldehyde/histidinol dehydrogenase
IPR005766 Delta l-pyrroline-5-carboxylate synthetase
IPR019797 Glutamate 5-kinase, conserved site
IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site
IPR011243 N-acetylglutamate synthase, animal
IPR001057 Glutamate 5-kinase
IPR000182 GCN5-related N-acetyltransferase
IPR006855 Protein of unknown function DUF619
IPR001048 Aspartate/glutamate/uridylate kinase
PDB Chain
ModBase
SWISS-MODEL
SCOP Domain

PublicationsHelp
1. Kikuchi Y, Kojima H, Tanaka T.
Mutational analysis of the feedback sites of lysine-sensitive aspartokinase of Escherichia coli.
FEMS Microbiol. Lett. 173 211-5 1999 [PubMed: 10220897]
http://dx.doi.org/10.1111/j.1574-6968.1999.tb13504.x
2. Kochhar S, Kochhar VK, Sane PV.
Subunit structure of lysine sensitive aspartate kinase from spinach leaves.
Biochem. Mol. Biol. Int. 44 795-806 1998 [PubMed: 9584993]
3. Zhu-Shimoni JX, Galili G.
Expression of an arabidopsis aspartate Kinase/Homoserine dehydrogenase gene is metabolically regulated by photosynthesis-related signals but not by nitrogenous compounds
Plant Physiol. 116 1023-8 1998 [PubMed: 9501134]
http://dx.doi.org/10.1104/pp.116.3.1023

Additional ReadingHelp
Egeblad-Welin L, Welin M, Wang L, Eriksson S.
Structural and functional investigations of Ureaplasma parvum UMP kinase--a potential antibacterial drug target.
FEBS J. 274 2007 6403-14 [PubMed: 18021254]
Ramon-Maiques S, Fernandez-Murga ML, Gil-Ortiz F, Vagin A, Fita I, Rubio V.
Structural bases of feed-back control of arginine biosynthesis, revealed by the structures of two hexameric N-acetylglutamate kinases, from Thermotoga maritima and Pseudomonas aeruginosa.
J. Mol. Biol. 356 2006 695-713 [PubMed: 16376937]
http://dx.doi.org/10.1016/j.jmb.2005.11.079
Kotaka M, Ren J, Lockyer M, Hawkins AR, Stammers DK.
Structures of R- and T-state Escherichia coli aspartokinase III. Mechanisms of the allosteric transition and inhibition by lysine.
J. Biol. Chem. 281 2006 31544-52 [PubMed: 16905770]
http://dx.doi.org/10.1074/jbc.M605886200
Ramon-Maiques S, Marina A, Uriarte M, Fita I, Rubio V.
The 1.5 A resolution crystal structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic Archaeon pyrococcus furiosus, bound to ADP, confirms that this thermostable enzyme is a carbamate kinase, and provides insight into substrate binding and stability in carbamate kinases.
J. Mol. Biol. 299 2000 463-76 [PubMed: 10860751]
http://dx.doi.org/10.1006/jmbi.2000.3779
Meyer P, Evrin C, Briozzo P, Joly N, Barzu O, Gilles AM.
Structural and functional characterization of Escherichia coli UMP kinase in complex with its allosteric regulator GTP.
J. Biol. Chem. 283 2008 36011-8 [PubMed: 18945668]
http://dx.doi.org/10.1074/jbc.M802614200
Mas-Droux C, Curien G, Robert-Genthon M, Laurencin M, Ferrer JL, Dumas R.
A novel organization of ACT domains in allosteric enzymes revealed by the crystal structure of Arabidopsis aspartate kinase.
Plant Cell 18 2006 1681-92 [PubMed: 16731588]
http://dx.doi.org/10.1105/tpc.105.040451
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InterPro 23.1