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InterPro: IPR000991 Glutamine amidotransferase class-I, C-terminal
Protein matches
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UniProtKB Matches: 12028 proteins |
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Accession
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IPR000991 GATase_class1_C |
Type
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Domain |
Signatures
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InterPro Relationships
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Parent
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IPR011702 Glutamine amidotransferase superfamily
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Children
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IPR001317 Carbamoyl phosphate synthase, GATase domain
IPR010139 Imidazole glycerol phosphate synthase, subunit H
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Found in
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IPR004468 CTP synthase
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GO Term annotation
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Function
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GO:0003824 catalytic activity
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InterPro annotation
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Entry Details in BioMart
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Abstract
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Glutamine amidotransferase (GATase) (EC:2.4.2) activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. This activity is found in a range of biosynthetic enzymes, including glutamine amidotransferase, anthranilate synthase component II, p-aminobenzoate, and glutamine-dependent carbamoyl-transferase (CPSase). Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. On the basis of sequence similarities two classes of GATase domains have been identified [1, 2], class-I (also known as trpG-type) and class-II (also known as purF-type). Class-I GATase domains are defined by a conserved catalytic triad consisting of cysteine, histidine and glutamate. Class-I GPTase domains have been found in the following enzymes, the second component of anthranilate synthase and 4-amino-4-deoxychorismate (ADC) synthase; CTP synthase; GMP synthase; glutamine-dependent carbamoyl-phosphate synthase; phosphoribosylformylglycinamidine synthase II; and the histidine amidotransferase hisH.
These signatures also detect peptidases belonging to MEROPS peptidase family C26 (gamma-glutamyl hydrolase), and non-peptidase homologs belonging to family C56 (PfpI endopeptidase) both of which are members of clan PC(C). Other members of family C56 are found in IPR002818.
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Structural links
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Database links
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Pfam Clan: CL0014.18
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Example proteins
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P05990 CAD protein
P17812 CTP synthase 1
P33734 Imidazole glycerol phosphate synthase hisHF
P70303 CTP synthase 2
Q09580 Probable GMP synthase [glutamine-hydrolyzing]
More proteins
Example Proteins Key
| InterPro entry accession number/name and structure databases |
Colour code |
| IPR013785 |
Aldolase-type TIM barrel |
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| IPR011702 |
Glutamine amidotransferase superfamily |
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| IPR002195 |
Dihydroorotase, conserved site |
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| IPR006062 |
Histidine biosynthesis |
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| IPR004739 |
GMP synthase, N-terminal |
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| IPR005479 |
Carbamoyl phosphate synthetase, large subunit, ATP-binding |
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| IPR011761 |
ATP-grasp fold |
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| IPR011059 |
Metal-dependent hydrolase, composite domain |
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| IPR006680 |
Amidohydrolase 1 |
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| IPR000991 |
Glutamine amidotransferase class-I, C-terminal |
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| IPR001674 |
GMP synthase, C-terminal |
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| IPR005481 |
Carbamoyl phosphate synthase, large subunit, N-terminal |
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| IPR005480 |
Carbamoyl phosphate synthetase, large subunit, oligomerisation |
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| IPR013816 |
ATP-grasp fold, subdomain 2 |
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| IPR013817 |
Pre-ATP-grasp fold |
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| IPR002082 |
Aspartate carbamoyltransferase, eukaryotic |
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| IPR004468 |
CTP synthase |
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| IPR014729 |
Rossmann-like alpha/beta/alpha sandwich fold |
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| IPR005483 |
Carbamoyl phosphate synthase, large subunit |
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| IPR004651 |
Histidine biosynthesis, HisF |
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| IPR018318 |
tRNA methyl transferase-like |
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| IPR017926 |
Glutamine amidotransferase type 1 |
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| IPR017456 |
CTP synthase, N-terminal |
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| IPR006220 |
Anthranilate synthase component II/delta crystallin |
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| IPR016185 |
PreATP-grasp-like fold |
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| IPR006130 |
Aspartate/ornithine carbamoyltransferase |
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| IPR010139 |
Imidazole glycerol phosphate synthase, subunit H |
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| IPR004722 |
Dihydroorotase multifunctional complex type |
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| IPR002474 |
Carbamoyl phosphate synthase, small subunit, N-terminal |
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| IPR006132 |
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding |
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| IPR006131 |
Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain |
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| IPR011607 |
MGS-like |
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| IPR014640 |
Imidazole glycerol phosphate synthase HisHF |
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| IPR011060 |
Ribulose-phosphate binding barrel |
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| IPR006275 |
Carbamoyl phosphate synthase, large subunit, glutamine-dependent |
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| IPR006274 |
Carbamoyl phosphate synthase, small subunit |
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| IPR001317 |
Carbamoyl phosphate synthase, GATase domain |
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ModBase |
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SWISS-MODEL |
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PDB Chain |
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CATH Domain |
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SCOP Domain |
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Additional Reading
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Goto M, Omi R, Nakagawa N, Miyahara I, Hirotsu K.
Crystal structures of CTP synthetase reveal ATP, UTP, and glutamine binding sites.
Structure 12 2004 1413-23
[PubMed: 15296735]
http://dx.doi.org/10.1016/j.str.2004.05.013
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Thoden JB, Huang X, Kim J, Raushel FM, Holden HM.
Long-range allosteric transitions in carbamoyl phosphate synthetase.
Protein Sci. 13 2004 2398-405
[PubMed: 15322282]
http://dx.doi.org/10.1110/ps.04822704
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Endrizzi JA, Kim H, Anderson PM, Baldwin EP.
Mechanisms of product feedback regulation and drug resistance in cytidine triphosphate synthetases from the structure of a CTP-inhibited complex.
Biochemistry 44 2005 13491-9
[PubMed: 16216072]
http://dx.doi.org/10.1021/bi051282o
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Endrizzi JA, Kim H, Anderson PM, Baldwin EP.
Crystal structure of Escherichia coli cytidine triphosphate synthetase, a nucleotide-regulated glutamine amidotransferase/ATP-dependent amidoligase fusion protein and homologue of anticancer and antiparasitic drug targets.
Biochemistry 43 2004 6447-63
[PubMed: 15157079]
http://dx.doi.org/10.1021/bi0496945
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Schwarzenbacher R, Deacon AM, Jaroszewski L, Brinen LS, Canaves JM, Dai X, Elsliger MA, Floyd R, Godzik A, Grittini C, Grzechnik SK, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Nelson MS, Ouyang J, Page R, Robb A, Quijano K, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA.
Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 A resolution.
Proteins 54 2004 801-5
[PubMed: 14997577]
http://dx.doi.org/10.1002/prot.10614
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