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InterPro: IPR000991 Glutamine amidotransferase class-I, C-terminal

Protein matchesHelp
UniProtKB
Matches:
12028 proteins
AccessionHelp IPR000991 GATase_class1_C
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR011702 Glutamine amidotransferase superfamily
Children IPR001317 Carbamoyl phosphate synthase, GATase domain
IPR010139 Imidazole glycerol phosphate synthase, subunit H
Found in IPR004468 CTP synthase
GO Term annotationHelp
Function GO:0003824 catalytic activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Glutamine amidotransferase (GATase) (EC:2.4.2) activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. This activity is found in a range of biosynthetic enzymes, including glutamine amidotransferase, anthranilate synthase component II, p-aminobenzoate, and glutamine-dependent carbamoyl-transferase (CPSase). Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. On the basis of sequence similarities two classes of GATase domains have been identified [1, 2], class-I (also known as trpG-type) and class-II (also known as purF-type). Class-I GATase domains are defined by a conserved catalytic triad consisting of cysteine, histidine and glutamate. Class-I GPTase domains have been found in the following enzymes, the second component of anthranilate synthase and 4-amino-4-deoxychorismate (ADC) synthase; CTP synthase; GMP synthase; glutamine-dependent carbamoyl-phosphate synthase; phosphoribosylformylglycinamidine synthase II; and the histidine amidotransferase hisH.

These signatures also detect peptidases belonging to MEROPS peptidase family C26 (gamma-glutamyl hydrolase), and non-peptidase homologs belonging to family C56 (PfpI endopeptidase) both of which are members of clan PC(C). Other members of family C56 are found in IPR002818.

Structural linksHelp
SCOP: c.23.16.1
CATH: 3.40.50.880
Database linksHelp
Enzyme: EC:6.3
PANDIT: PF00117
Blocks: IPB000991
MEROPS: C26 , C56
Pfam Clan: CL0014.18

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000991 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P05990 CAD protein

P17812 CTP synthase 1

P33734 Imidazole glycerol phosphate synthase hisHF

P70303 CTP synthase 2

Q09580 Probable GMP synthase [glutamine-hydrolyzing]

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013785 Aldolase-type TIM barrel
IPR011702 Glutamine amidotransferase superfamily
IPR002195 Dihydroorotase, conserved site
IPR006062 Histidine biosynthesis
IPR004739 GMP synthase, N-terminal
IPR005479 Carbamoyl phosphate synthetase, large subunit, ATP-binding
IPR011761 ATP-grasp fold
IPR011059 Metal-dependent hydrolase, composite domain
IPR006680 Amidohydrolase 1
IPR000991 Glutamine amidotransferase class-I, C-terminal
IPR001674 GMP synthase, C-terminal
IPR005481 Carbamoyl phosphate synthase, large subunit, N-terminal
IPR005480 Carbamoyl phosphate synthetase, large subunit, oligomerisation
IPR013816 ATP-grasp fold, subdomain 2
IPR013817 Pre-ATP-grasp fold
IPR002082 Aspartate carbamoyltransferase, eukaryotic
IPR004468 CTP synthase
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR005483 Carbamoyl phosphate synthase, large subunit
IPR004651 Histidine biosynthesis, HisF
IPR018318 tRNA methyl transferase-like
IPR017926 Glutamine amidotransferase type 1
IPR017456 CTP synthase, N-terminal
IPR006220 Anthranilate synthase component II/delta crystallin
IPR016185 PreATP-grasp-like fold
IPR006130 Aspartate/ornithine carbamoyltransferase
IPR010139 Imidazole glycerol phosphate synthase, subunit H
IPR004722 Dihydroorotase multifunctional complex type
IPR002474 Carbamoyl phosphate synthase, small subunit, N-terminal
IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
IPR011607 MGS-like
IPR014640 Imidazole glycerol phosphate synthase HisHF
IPR011060 Ribulose-phosphate binding barrel
IPR006275 Carbamoyl phosphate synthase, large subunit, glutamine-dependent
IPR006274 Carbamoyl phosphate synthase, small subunit
IPR001317 Carbamoyl phosphate synthase, GATase domain
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Weng ML, Zalkin H.
Structural role for a conserved region in the CTP synthetase glutamine amide transfer domain.
J. Bacteriol. 169 3023-8 1987 [PubMed: 3298209]
http://www.pubmedcentral.nih.gov/picrender.fcgi?tool=EBI&pubmedid=3298209&action=stream&blobtype=pdf
2. Nyunoya H, Lusty CJ.
Sequence of the small subunit of yeast carbamyl phosphate synthetase and identification of its catalytic domain.
J. Biol. Chem. 259 9790-8 1984 [PubMed: 6086650]
http://intl.jbc.org/cgi/content/abstract/259/15/9790

Additional ReadingHelp
Goto M, Omi R, Nakagawa N, Miyahara I, Hirotsu K.
Crystal structures of CTP synthetase reveal ATP, UTP, and glutamine binding sites.
Structure 12 2004 1413-23 [PubMed: 15296735]
http://dx.doi.org/10.1016/j.str.2004.05.013
Thoden JB, Huang X, Kim J, Raushel FM, Holden HM.
Long-range allosteric transitions in carbamoyl phosphate synthetase.
Protein Sci. 13 2004 2398-405 [PubMed: 15322282]
http://dx.doi.org/10.1110/ps.04822704
Endrizzi JA, Kim H, Anderson PM, Baldwin EP.
Mechanisms of product feedback regulation and drug resistance in cytidine triphosphate synthetases from the structure of a CTP-inhibited complex.
Biochemistry 44 2005 13491-9 [PubMed: 16216072]
http://dx.doi.org/10.1021/bi051282o
Endrizzi JA, Kim H, Anderson PM, Baldwin EP.
Crystal structure of Escherichia coli cytidine triphosphate synthetase, a nucleotide-regulated glutamine amidotransferase/ATP-dependent amidoligase fusion protein and homologue of anticancer and antiparasitic drug targets.
Biochemistry 43 2004 6447-63 [PubMed: 15157079]
http://dx.doi.org/10.1021/bi0496945
Schwarzenbacher R, Deacon AM, Jaroszewski L, Brinen LS, Canaves JM, Dai X, Elsliger MA, Floyd R, Godzik A, Grittini C, Grzechnik SK, Klock HE, Koesema E, Kovarik JS, Kreusch A, Kuhn P, Lesley SA, McMullan D, McPhillips TM, Miller MD, Morse A, Moy K, Nelson MS, Ouyang J, Page R, Robb A, Quijano K, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Vincent J, von Delft F, Wang X, West B, Wolf G, Hodgson KO, Wooley J, Wilson IA.
Crystal structure of a putative glutamine amido transferase (TM1158) from Thermotoga maritima at 1.7 A resolution.
Proteins 54 2004 801-5 [PubMed: 14997577]
http://dx.doi.org/10.1002/prot.10614
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InterPro 23.1