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InterPro: IPR000836 Phosphoribosyltransferase
Protein matches
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UniProtKB Matches: 15750 proteins |
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Accession
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IPR000836 PRibTrfase |
Type
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Domain |
Signatures
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InterPro Relationships
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Children
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IPR004467 Orotate phosphoribosyl transferase
IPR005764 Adenine phosphoribosyl transferase
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Found in
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IPR005765 Uracil phosphoribosyl transferase
IPR005854 Amidophosphoribosyl transferase
IPR005904 Hypoxanthine phosphoribosyl transferase
IPR005946 Phosphoribosyl pyrophosphokinase
IPR006273 Orotate phosphoribosyltransferase, Thermus type
IPR010078 Pur operon repressor
IPR010079 Xanthine phosphoribosyltransferase
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Contains
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IPR002375 Purine/pyrimidine phosphoribosyl transferase, conserved site
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GO Term annotation
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Process
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GO:0009116 nucleoside metabolic process
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InterPro annotation
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Entry Details in BioMart
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Abstract
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The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage [1]. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (EC:2.4.2.7); hypoxanthine-guanine-xanthine phosphoribosyltransferase;
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); ribose-phosphate pyrophosphokinase (EC:2.7.6.1); amidophosphoribosyltransferase (EC:2.4.2.14); orotate phosphoribosyltransferase (EC:2.4.2.10);uracil phosphoribosyltransferase (EC:2.4.2.9); and xanthine-guanine phosphoribosyltransferase
(EC:2.4.2.22).
Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes.
Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [2, 3]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%.
The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.
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Structural links
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Database links
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Additional Reading
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Chen Q, You D, Liang Y, Su X, Gu X, Luo M, Zheng X.
Crystal structure of Thermoanaerobacter tengcongensis hypoxanthine-guanine phosphoribosyl transferase L160I mutant--insights into inhibitor design.
FEBS J. 274 2007 4408-15
[PubMed: 17662107]
http://dx.doi.org/10.1111/j.1742-4658.2007.05970.x
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Monzani PS, Trapani S, Thiemann OH, Oliva G.
Crystal structure of Leishmania tarentolae hypoxanthine-guanine phosphoribosyltransferase.
BMC Struct. Biol. 7 2007 59
[PubMed: 17894860]
http://dx.doi.org/10.1186/1472-6807-7-59
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Li S, Lu Y, Peng B, Ding J.
Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site.
Biochem. J. 401 2007 39-47
[PubMed: 16939420]
http://dx.doi.org/10.1042/BJ20061066
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Gonzalez-Segura L, Witte JF, McClard RW, Hurley TD.
Ternary complex formation and induced asymmetry in orotate phosphoribosyltransferase.
Biochemistry 46 2007 14075-86
[PubMed: 18020427]
http://dx.doi.org/10.1021/bi701023z
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Silva CH, Silva M, Iulek J, Thiemann OH.
Structural complexes of human adenine phosphoribosyltransferase reveal novel features of the APRT catalytic mechanism.
J. Biomol. Struct. Dyn. 25 2008 589-97
[PubMed: 18399692]
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InterPro 23.1
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