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InterPro: IPR000836 Phosphoribosyltransferase

Protein matchesHelp
UniProtKB
Matches:
15750 proteins
AccessionHelp IPR000836 PRibTrfase
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Children IPR004467 Orotate phosphoribosyl transferase
IPR005764 Adenine phosphoribosyl transferase
Found in IPR005765 Uracil phosphoribosyl transferase
IPR005854 Amidophosphoribosyl transferase
IPR005904 Hypoxanthine phosphoribosyl transferase
IPR005946 Phosphoribosyl pyrophosphokinase
IPR006273 Orotate phosphoribosyltransferase, Thermus type
IPR010078 Pur operon repressor
IPR010079 Xanthine phosphoribosyltransferase
Contains IPR002375 Purine/pyrimidine phosphoribosyl transferase, conserved site
GO Term annotationHelp
Process GO:0009116 nucleoside metabolic process
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage [1]. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (EC:2.4.2.7); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); ribose-phosphate pyrophosphokinase (EC:2.7.6.1); amidophosphoribosyltransferase (EC:2.4.2.14); orotate phosphoribosyltransferase (EC:2.4.2.10);uracil phosphoribosyltransferase (EC:2.4.2.9); and xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22).

Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes.

Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [2, 3]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.

Structural linksHelp
PDB - click here
SCOP: c.61.1.1 , c.61.1.2
Database linksHelp
Enzyme: EC:2.4.2
PANDIT: PF00156
MEROPS: C44

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000836 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
O60256 Phosphoribosyl pyrophosphate synthetase-associated protein 2

P00493 Hypoxanthine-guanine phosphoribosyltransferase

P12426 Adenine phosphoribosyltransferase

P13298 Orotate phosphoribosyltransferase 1

P91455 Adenine phosphoribosyltransferase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR005904 Hypoxanthine phosphoribosyl transferase
IPR005764 Adenine phosphoribosyl transferase
IPR004467 Orotate phosphoribosyl transferase
IPR005946 Phosphoribosyl pyrophosphokinase
IPR007337 RelB antitoxin
IPR000836 Phosphoribosyltransferase
SWISS-MODEL
PDB Chain
ModBase
CATH Domain

PublicationsHelp
1. Sinha SC, Smith JL.
The PRT protein family.
Curr. Opin. Struct. Biol. 11 733-9 2001 [PubMed: 11751055]
http://dx.doi.org/10.1016/S0959-440X(01)00274-3
2. Hove-Jensen B, Harlow KW, King CJ, Switzer RL.
Phosphoribosylpyrophosphate synthetase of Escherichia coli. Properties of the purified enzyme and primary structure of the prs gene.
J. Biol. Chem. 261 6765-71 1986 [PubMed: 3009477]
http://intl.jbc.org/cgi/content/abstract/261/15/6765
3. Hershey HV, Taylor MW.
Nucleotide sequence and deduced amino acid sequence of Escherichia coli adenine phosphoribosyltransferase and comparison with other analogous enzymes.
Gene 43 287-93 1986 [PubMed: 3527873]
http://dx.doi.org/10.1016/0378-1119(86)90218-0

Additional ReadingHelp
Chen Q, You D, Liang Y, Su X, Gu X, Luo M, Zheng X.
Crystal structure of Thermoanaerobacter tengcongensis hypoxanthine-guanine phosphoribosyl transferase L160I mutant--insights into inhibitor design.
FEBS J. 274 2007 4408-15 [PubMed: 17662107]
http://dx.doi.org/10.1111/j.1742-4658.2007.05970.x
Monzani PS, Trapani S, Thiemann OH, Oliva G.
Crystal structure of Leishmania tarentolae hypoxanthine-guanine phosphoribosyltransferase.
BMC Struct. Biol. 7 2007 59 [PubMed: 17894860]
http://dx.doi.org/10.1186/1472-6807-7-59
Li S, Lu Y, Peng B, Ding J.
Crystal structure of human phosphoribosylpyrophosphate synthetase 1 reveals a novel allosteric site.
Biochem. J. 401 2007 39-47 [PubMed: 16939420]
http://dx.doi.org/10.1042/BJ20061066
Gonzalez-Segura L, Witte JF, McClard RW, Hurley TD.
Ternary complex formation and induced asymmetry in orotate phosphoribosyltransferase.
Biochemistry 46 2007 14075-86 [PubMed: 18020427]
http://dx.doi.org/10.1021/bi701023z
Silva CH, Silva M, Iulek J, Thiemann OH.
Structural complexes of human adenine phosphoribosyltransferase reveal novel features of the APRT catalytic mechanism.
J. Biomol. Struct. Dyn. 25 2008 589-97 [PubMed: 18399692]
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InterPro 23.1