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InterPro: IPR000794 Beta-ketoacyl synthase

Protein matchesHelp
UniProtKB
Matches:
11915 proteins
AccessionHelp IPR000794 Beta-ketoacyl_synthase
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Children IPR004432 Polyketide-type polyunsaturated fatty acid synthase, PfaA
IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA
IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2
Contains IPR001227 Acyl transferase domain
IPR013968 Polyketide synthase, KR
IPR014030 Beta-ketoacyl synthase, N-terminal
IPR014031 Beta-ketoacyl synthase, C-terminal
IPR014043 Acyl transferase
IPR014181 Omega-3 polyunsaturated fatty acid synthase-like
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding
IPR016038 Thiolase-like, subgroup
IPR018201 Beta-ketoacyl synthase, active site
IPR020801 Polyketide synthase, acyl transferase domain
IPR020806 Polyketide synthase, phosphopantetheine-binding
IPR020807 Polyketide synthase, dehydratase domain
IPR020841 Polyketide synthase, beta-ketoacyl synthase region
IPR020842 Polyketide synthase/Fatty acid synthase, KR
IPR020843 Polyketide synthase, enoylreductase
GO Term annotationHelp
Process GO:0009058 biosynthetic process
Function GO:0003824 catalytic activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Beta-ketoacyl-ACP synthase EC:2.3.1.41 (KAS) [1] is the enzyme that catalyses the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyses the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [2], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide.

Structural linksHelp
PDB - click here
Database linksHelp
Blocks: IPB000794

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000794 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P19096 Fatty acid synthase

P19097 Fatty acid synthase subunit alpha

P49327 Fatty acid synthase

P73283 3-oxoacyl-[acyl-carrier-protein] synthase 2

Q8L3X9 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR001227 Acyl transferase domain
IPR013149 Alcohol dehydrogenase, zinc-binding
IPR020843 Polyketide synthase, enoylreductase
IPR016039 Thiolase-like
IPR016038 Thiolase-like, subgroup
IPR014030 Beta-ketoacyl synthase, N-terminal
IPR018201 Beta-ketoacyl synthase, active site
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding
IPR002198 Short-chain dehydrogenase/reductase SDR
IPR020842 Polyketide synthase/Fatty acid synthase, KR
IPR008278 4'-phosphopantetheinyl transferase
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
IPR014031 Beta-ketoacyl synthase, C-terminal
IPR011032 GroES-like
IPR016040 NAD(P)-binding domain
IPR009081 Acyl carrier protein-like
IPR006162 Phosphopantetheine attachment site
IPR006163 Phosphopantetheine-binding
IPR000794 Beta-ketoacyl synthase
IPR014043 Acyl transferase
IPR004568 Phosphopantethiene-protein transferase
IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2
IPR001031 Thioesterase
IPR013217 Methyltransferase type 12
ModBase
SWISS-MODEL
PDB Chain
CATH Domain
SCOP Domain

PublicationsHelp
1. Kauppinen S, Siggaard-Andersen M, von Wettstein-Knowles P.
beta-Ketoacyl-ACP synthase I of Escherichia coli: nucleotide sequence of the fabB gene and identification of the cerulenin binding residue.
Carlsberg Res. Commun. 53 357-70 1988 [PubMed: 3076376]
2. Beck J, Ripka S, Siegner A, Schiltz E, Schweizer E.
The multifunctional 6-methylsalicylic acid synthase gene of Penicillium patulum. Its gene structure relative to that of other polyketide synthases.
Eur. J. Biochem. 192 487-98 1990 [PubMed: 2209605]
http://dx.doi.org/10.1111/j.1432-1033.1990.tb19252.x

Additional ReadingHelp
Bagautdinov B, Ukita Y, Miyano M, Kunishima N.
Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 64 2008 358-66 [PubMed: 18453702]
Pappenberger G, Schulz-Gasch T, Kusznir E, Muller F, Hennig M.
Structure-assisted discovery of an aminothiazole derivative as a lead molecule for inhibition of bacterial fatty-acid synthesis.
Acta Crystallogr. D Biol. Crystallogr. 63 2007 1208-16 [PubMed: 18084068]
http://dx.doi.org/10.1107/S0907444907049852
Ploskon E, Arthur CJ, Evans SE, Williams C, Crosby J, Simpson TJ, Crump MP.
A mammalian type I fatty acid synthase acyl carrier protein domain does not sequester acyl chains.
J. Biol. Chem. 283 2008 518-28 [PubMed: 17971456]
http://dx.doi.org/10.1074/jbc.M703454200
Christensen CE, Kragelund BB, von Wettstein-Knowles P, Henriksen A.
Structure of the human beta-ketoacyl [ACP] synthase from the mitochondrial type II fatty acid synthase.
Protein Sci. 16 2007 261-72 [PubMed: 17242430]
http://dx.doi.org/10.1110/ps.062473707
Pemble CW 4th, Johnson LC, Kridel SJ, Lowther WT.
Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat.
Nat. Struct. Mol. Biol. 14 2007 704-9 [PubMed: 17618296]
http://dx.doi.org/10.1038/nsmb1265
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InterPro 23.1