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InterPro: IPR000771 Ketose-bisphosphate aldolase, class-II

Protein matchesHelp
UniProtKB
Matches:
2660 proteins
AccessionHelp IPR000771 Ketose_bisP_aldolase_II
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Children IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype
IPR011288 Class II aldolase, tagatose bisphosphate
IPR011289 Fructose-1,6-bisphosphate aldolase, class II
Contains IPR013785 Aldolase-type TIM barrel
GO Term annotationHelp
Process GO:0006096 glycolysis
Function GO:0004332 fructose-bisphosphate aldolase activity
GO:0008270 zinc ion binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Fructose-bisphosphate aldolase [1, 2] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [2], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [3].

Structural linksHelp
SCOP: c.1.10.2
CATH: 3.20.20.70
Database linksHelp
PDBe-motif: PS00602 , PS00806
Enzyme: EC:4.1.2
PROSITE doc: PDOC00523
PANDIT: PF01116
Blocks: IPB000771

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000771 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P0AB71 Fructose-bisphosphate aldolase class 2

P14540 Fructose-bisphosphate aldolase

P36580 Fructose-bisphosphate aldolase

Q55664 Fructose-bisphosphate aldolase class 2

Q8YNK2 Fructose-bisphosphate aldolase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR013785 Aldolase-type TIM barrel
IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype
IPR000771 Ketose-bisphosphate aldolase, class-II
IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain
CATH Domain

PublicationsHelp
1. Perham RN.
The fructose-1,6-bisphosphate aldolases: same reaction, different enzymes.
Biochem. Soc. Trans. 18 185-7 1990 [PubMed: 2199259]
2. Marsh JJ, Lebherz HG.
Fructose-bisphosphate aldolases: an evolutionary history.
Trends Biochem. Sci. 17 110-3 1992 [PubMed: 1412694]
http://dx.doi.org/10.1016/0968-0004(92)90247-7
3. Berry A, Marshall KE.
Identification of zinc-binding ligands in the class II fructose-1,6-bisphosphate aldolase of Escherichia coli.
FEBS Lett. 318 11-6 1993 [PubMed: 8436219]
http://dx.doi.org/10.1016/0014-5793(93)81317-S

Additional ReadingHelp
Hall DR, Bond CS, Leonard GA, Watt CI, Berry A, Hunter WN.
Structure of tagatose-1,6-bisphosphate aldolase. Insight into chiral discrimination, mechanism, and specificity of class II aldolases.
J. Biol. Chem. 277 2002 22018-24 [PubMed: 11940603]
http://dx.doi.org/10.1074/jbc.M202464200
Blom NS, Tetreault S, Coulombe R, Sygusch J.
Novel active site in Escherichia coli fructose 1,6-bisphosphate aldolase.
Nat. Struct. Biol. 3 1996 856-62 [PubMed: 8836102]
http://dx.doi.org/10.1038/nsb1096-856
Hall DR, Kemp LE, Leonard GA, Marshall K, Berry A, Hunter WN.
The organization of divalent cations in the active site of cadmium Escherichia coli fructose-1,6-bisphosphate aldolase.
Acta Crystallogr. D Biol. Crystallogr. 59 2003 611-4 [PubMed: 12595741]
http://dx.doi.org/10.1107/S0907444902023661
Lee JH, Bae J, Kim D, Choi Y, Im YJ, Koh S, Kim JS, Kim MK, Kang GB, Hong SI, Lee DS, Eom SH.
Stereoselectivity of fructose-1,6-bisphosphate aldolase in Thermus caldophilus.
Biochem. Biophys. Res. Commun. 347 2006 616-25 [PubMed: 16843441]
http://dx.doi.org/10.1016/j.bbrc.2006.06.139
Hall DR, Leonard GA, Reed CD, Watt CI, Berry A, Hunter WN.
The crystal structure of Escherichia coli class II fructose-1, 6-bisphosphate aldolase in complex with phosphoglycolohydroxamate reveals details of mechanism and specificity.
J. Mol. Biol. 287 1999 383-94 [PubMed: 10080900]
http://dx.doi.org/10.1006/jmbi.1999.2609
Izard T, Sygusch J.
Induced fit movements and metal cofactor selectivity of class II aldolases: structure of Thermus aquaticus fructose-1,6-bisphosphate aldolase.
J. Biol. Chem. 279 2004 11825-33 [PubMed: 14699122]
http://dx.doi.org/10.1074/jbc.M311375200
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InterPro 23.1