spacer
spacer

Jump to: InterProScan Databases Documentation FTP site Help Advanced search

InterPro: IPR000763 Catalase-peroxidase haem

Protein matchesHelp
UniProtKB
Matches:
904 proteins
AccessionHelp IPR000763 Catalase_peroxidase
SecondaryHelp IPR004444
TypeHelp Family
SignaturesHelp
InterPro RelationshipsHelp
Parent IPR010255 Haem peroxidase
Contains IPR002016 Haem peroxidase, plant/fungal/bacterial
IPR019793 Peroxidases heam-ligand binding site
IPR019794 Peroxidase, active site
GO Term annotationHelp
Process GO:0006979 response to oxidative stress
GO:0055114 oxidation reduction
Function GO:0004096 catalase activity
GO:0004601 peroxidase activity
GO:0020037 heme binding
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

Haem-containing catalase-peroxidases are bifunctional antioxidant enzymes that exhibit both catalase (EC:1.11.1.6) and peroxidase (EC:1.11.1.7) activity, and which are present in many fungal, archaeal and bacterial species. These enzymes provide protection against oxidative stress by neutralising hydrogen peroxide, and are closely related to plant peroxidases [1]. They do not share sequence similarity with mono-functional, haem-containing catalases (IPR002226) that are ubiquitous in aerobic organisms, nor with non-haem manganese-containing catalases found in bacteria (IPR007760) [2]. Catalases convert two hydrogen peroxide molecules into water and molecular oxygen in a two-step reaction cycle that uses the two hydrogen peroxide molecules to alternately oxidise and reduce the haem iron. Peroxidases use hydrogen peroxide to oxidise the haem iron, but use different hydrogen donors such as NADH to then reduce the haem.

The structure of the catalase-peroxidase from the archaeon, Haloarcula marismortui, reveals a dimer of two identical subunits [3], although some catalase-peroxidases exist as homotetramers. The general topology, as well as the arrangement of the catalytic residues and haem in the active site, are similar to other class I peroxidases. However, the location of the haem group deeply buried inside the domain is typical of a catalase. The primary structure of the subunit can be divided into two similar halves, which may have arisen from a gene duplication event.

Structural linksHelp
SCOP: a.93.1.3
Database linksHelp
Blocks: IPB000763
COMe: PRX000335

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000763 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
A1C8R3 Catalase-peroxidase

O59651 Catalase-peroxidase 2

P13029 Catalase-peroxidase

P73911 Catalase-peroxidase

Q31MN3 Catalase-peroxidase

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR000763 Catalase-peroxidase haem
IPR010255 Haem peroxidase
IPR019794 Peroxidase, active site
IPR019793 Peroxidases heam-ligand binding site
IPR002016 Haem peroxidase, plant/fungal/bacterial
SWISS-MODEL
PDB Chain
ModBase
CATH Domain
SCOP Domain

PublicationsHelp
1. Welinder KG.
Bacterial catalase-peroxidases are gene duplicated members of the plant peroxidase superfamily.
Biochim. Biophys. Acta 1080 215-20 1991 [PubMed: 1954228]
2. Chelikani P, Fita I, Loewen PC.
Diversity of structures and properties among catalases.
Cell. Mol. Life Sci. 61 192-208 2004 [PubMed: 14745498]
http://dx.doi.org/10.1007/s00018-003-3206-5
3. Yamada Y, Fujiwara T, Sato T, Igarashi N, Tanaka N.
The 2.0 A crystal structure of catalase-peroxidase from Haloarcula marismortui.
Nat. Struct. Biol. 9 691-5 2002 [PubMed: 12172540]
http://dx.doi.org/10.1038/nsb834

Additional ReadingHelp
Carpena X, Wiseman B, Deemagarn T, Singh R, Switala J, Ivancich A, Fita I, Loewen PC.
A molecular switch and electronic circuit modulate catalase activity in catalase-peroxidases.
EMBO Rep. 6 2005 1156-62 [PubMed: 16211084]
http://dx.doi.org/10.1038/sj.embor.7400550
Deemagarn T, Carpena X, Singh R, Wiseman B, Fita I, Loewen PC.
Structural characterization of the Ser324Thr variant of the catalase-peroxidase (KatG) from Burkholderia pseudomallei.
J. Mol. Biol. 345 2005 21-8 [PubMed: 15567407]
http://dx.doi.org/10.1016/j.jmb.2004.10.020
Li H, Poulos TL.
Structural variation in heme enzymes: a comparative analysis of peroxidase and P450 crystal structures.
Structure 2 1994 461-4 [PubMed: 7922023]
http://dx.doi.org/10.1016/S0969-2126(00)00046-0
Hochman A, Figueredo A, Wall JD.
Physiological functions of hydroperoxidases in Rhodobacter capsulatus.
J. Bacteriol. 174 1992 3386-91 [PubMed: 1577703]
http://jb.asm.org/cgi/content/abstract/174/10/3386
Deemagarn T, Wiseman B, Carpena X, Ivancich A, Fita I, Loewen PC.
Two alternative substrate paths for compound I formation and reduction in catalase-peroxidase KatG from Burkholderia pseudomallei.
Proteins 66 2007 219-28 [PubMed: 17063492]
http://dx.doi.org/10.1002/prot.21209
Zhao X, Yu H, Yu S, Wang F, Sacchettini JC, Magliozzo RS.
Hydrogen peroxide-mediated isoniazid activation catalyzed by Mycobacterium tuberculosis catalase-peroxidase (KatG) and its S315T mutant.
Biochemistry 45 2006 4131-40 [PubMed: 16566587]
http://dx.doi.org/10.1021/bi051967o
Carpena X, Wiseman B, Deemagarn T, Herguedas B, Ivancich A, Singh R, Loewen PC, Fita I.
Roles for Arg426 and Trp111 in the modulation of NADH oxidase activity of the catalase-peroxidase KatG from Burkholderia pseudomallei inferred from pH-induced structural changes.
Biochemistry 45 2006 5171-9 [PubMed: 16618106]
http://dx.doi.org/10.1021/bi060017f
spacer
spacer
InterPro 23.1