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InterPro: IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase

Protein matchesHelp
UniProtKB
Matches:
1386 proteins
AccessionHelp IPR000706 AGPR_act_site
TypeHelp Domain
SignaturesHelp
InterPro RelationshipsHelp
Found in IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, subtype
IPR011241 NAGK-NAGSA, bifunctional
Contains IPR000534 Semialdehyde dehydrogenase, NAD-binding
GO Term annotationHelp
Process GO:0006526 arginine biosynthetic process
Function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
InterPro annotation
BioMart Logo Entry Details in BioMart
AbstractHelp

N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymatic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined [1].

The pathway from glutamate to arginine is:

  • NAGS; N-acetylglutamate synthase (EC:2.3.1.1) (glutamate to N-acetylglutamate)
  • NAGK; N-acetylglutamate kinase (EC:2.7.2.8) (N-acetylglutamate to N-acetylglutamate-5P)
  • NAGSA; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) (N-acetylglutamate-5P to N-acetylglumate semialdehyde)
  • Acetylornithine aminotransferase (EC:2.6.1.11) (N-acetylglumate semialdehyde to N-acetylornithine)
  • Acetylornithine deacetylase (EC:3.5.1.16) (N-acetylornithine to ornithine)
  • Arginase (EC:3.5.3.1) (ornithine to arginine)

N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) (AGPR) [2, 3] is the enzyme that catalyses the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38 kDa (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (EC:2.7.2.8) domain and a C-terminal AGPR domain. In the Escherichia coli enzyme, a cysteine has been shown to be implicated in the catalytic activity, and the region around this residue is well conserved.

Structural linksHelp
SCOP: c.2.1.3 , d.81.1.1
Database linksHelp
PDBe-motif: PS01224
Enzyme: EC:1.2.1.38
PROSITE doc: PDOC00941
Blocks: IPB000706

Taxonomic coverageHelp

Overlapping InterPro entriesHelp
IPR000706 Numbers of overlapping proteins Average numbers of overlapping amino acids

Example proteinsHelp
P54899 N-acetyl-gamma-glutamyl-phosphate reductase

P59310 N-acetyl-gamma-glutamyl-phosphate reductase

Q01217 Protein ARG5,6, mitochondrial

Q6AV34 Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic

Q93Z70 Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic

More proteins


Example Proteins Key


InterPro entry accession number/name and structure databases Colour code
IPR016040 NAD(P)-binding domain
IPR012280 Semialdehyde dehydrogenase, dimerisation domain
IPR004662 Acetylglutamate kinase
IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase
IPR006855 Protein of unknown function DUF619
IPR011241 NAGK-NAGSA, bifunctional
IPR001048 Aspartate/glutamate/uridylate kinase
IPR000534 Semialdehyde dehydrogenase, NAD-binding
SWISS-MODEL
PDB Chain
ModBase
SCOP Domain

PublicationsHelp
1. Caldovic L, Tuchman M.
N-acetylglutamate and its changing role through evolution.
Biochem. J. 372 279-90 2003 [PubMed: 12633501]
http://dx.doi.org/10.1042/BJ20030002
2. Ludovice M, Martin JF, Carrachas P, Liras P.
Characterization of the Streptomyces clavuligerus argC gene encoding N-acetylglutamyl-phosphate reductase: expression in Streptomyces lividans and effect on clavulanic acid production.
J. Bacteriol. 174 4606-13 1992 [PubMed: 1339424]
http://ukpmc.ac.uk/picrender.cgi?tool=EBI&pubmedid=1339424&action=stream&blobtype=pdf
3. Gessert SF, Kim JH, Nargang FE, Weiss RL.
A polyprotein precursor of two mitochondrial enzymes in Neurospora crassa. Gene structure and precursor processing.
J. Biol. Chem. 269 8189-203 1994 [PubMed: 7907589]
http://intl.jbc.org/cgi/content/abstract/269/11/8189

Additional ReadingHelp
Levin EJ, Kondrashov DA, Wesenberg GE, Phillips GN Jr.
Ensemble refinement of protein crystal structures: validation and application.
Structure 15 2007 1040-52 [PubMed: 17850744]
http://dx.doi.org/10.1016/j.str.2007.06.019
Nonaka T, Kita A, Miura-Ohnuma J, Katoh E, Inagaki N, Yamazaki T, Miki K.
Crystal structure of putative N-acetyl-gamma-glutamyl-phosphate reductase (AK071544) from rice (Oryza sativa).
Proteins 61 2005 1137-40 [PubMed: 16240442]
http://dx.doi.org/10.1002/prot.20679
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InterPro 23.1